Evidence map›Paper›PMID 21163942›Full record

ArticleThe Journal of biological chemistry2011

Nutrients and the Pkh1/2 and Pkc1 protein kinases control mRNA decay and P-body assembly in yeast.

Guangzuo Luo, Michael Costanzo, Charles Boone, Robert C Dickson

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 29 citations in OpenAlex.

  1. Processing body (P-body) and its mediators in cancer.Molecular and cellular biochemistry · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Guangzuo LuoDepartment of Molecular and Cellular Biochemistry and the Lucille Markey Cancer Center, University of Kentucky College of Medicine, Lexington, Kentucky 40536, USA.
Michael Costanzo
Charles Boone
Robert C Dickson
University of Toronto · CAMarkey Cancer Center · USUniversity of Kentucky · US

Funding

UNDERSTANDING THE MOLECULAR BASIS OF EPIGENETIC TRANSCRIPTIONAL SILENCINGP20RR020171 · NCRR · UNIVERSITY OF KENTUCKY · PI LOUIS HERSH, LOUIS HERSH LOUIS HERSH · 2004 to 2011
$16.5M
MOLECULAR GENETIC ANALYSIS OF YEAST SPHINGOLIPIDSR01GM041302 · NIGMS · UNIVERSITY OF KENTUCKY · PI DICKSON, ROBERT C · 1989 to 2005
$1.9M
CIHRNCRR NIH HHS P20 RR020171NCRR NIH HHS P20-RR020171NIGMS NIH HHS GM41302NIGMS NIH HHS R01 GM041302
6 · The paper itself

Abstract

Regulated mRNA decay is essential for eukaryotic survival but the mechanisms for regulating global decay and coordinating it with growth, nutrient, and environmental cues are not known. Here we show that a signal transduction pathway containing the Pkh1/Pkh2 protein kinases and one of their effector kinases, Pkc1, is required for and regulates global mRNA decay at the deadenylation step in Saccharomyces cerevisiae. Additionally, many stresses disrupt protein synthesis and release mRNAs from polysomes for incorporation into P-bodies for degradation or storage. We find that the Pkh1/2-Pkc1 pathway is also required for stress-induced P-body assembly. Control of mRNA decay and P-body assembly by the Pkh-Pkc1 pathway only occurs in nutrient-poor medium, suggesting a novel role for these processes in evolution. Our identification of a signaling pathway for regulating global mRNA decay and P-body assembly provides a means to coordinate mRNA decay with other cellular processes essential for growth and long-term survival. Mammals may use similar regulatory mechanisms because components of the decay apparatus and signaling pathways are conserved.

Indexed as

3-Phosphoinositide-Dependent Protein KinasesProtein BiosynthesisProtein Kinase CProtein Serine-Threonine KinasesRibosomesRNA, FungalRNA, MessengerRNA StabilitySaccharomyces cerevisiaeSaccharomyces cerevisiae Proteins3-Phosphoinositide-Dependent Protein KinasesPKC1 protein, S cerevisiaePKH1 protein, S cerevisiaePKH2 protein, S cerevisiaeProtein Kinase CProtein Serine-Threonine KinasesRNA, FungalRNA, MessengerSaccharomyces cerevisiae Proteins

Identifiers

PMID21163942
PMCPMC3059008
OpenAlexW1984866643

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.