Evidence map›Paper›PMID 21161258›Full record

ArticleChromosoma2011

Variation in crossover rates across a 3-Mb contig of bread wheat (Triticum aestivum) reveals the presence of a meiotic recombination hotspot.

Cyrille Saintenac, Sébastien Faure, Arnaud Remay, Frédéric Choulet, Catherine Ravel, Etienne Paux, François Balfourier, Catherine Feuillet, Pierre Sourdille

Abstract read
PubMed Publisher
In one paragraph

Article in Chromosoma, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
5.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 69 citations in OpenAlex.

  1. Article
  2. Review
  3. Impact of Alien Chromosome Introgression fromPlants (Basel, Switzerland) · 2025
    Article
  4. Heterochromatin in plant meiosis.Nucleus (Austin, Tex.) · 2024
    Review
  5. Molecular mechanisms and regulation of recombination frequency and distribution in plants.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Review
  6. Identification of structural variations related to drought tolerance in wheat (Triticum aestivum L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  7. Article
  8. Review
  9. Variations of wheat (Frontiers in plant science · 2022
    Article
  10. Article
  11. Article
  12. Article
  13. Production of a complete set of wheat-barley group-7 chromosome recombinants with increased grain β-glucan content.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Article
  14. Equipping Durum Wheat-Frontiers in plant science · 2019
    Article
  15. Article
  16. Article
  17. Low-coverage resequencing detects meiotic recombination pattern and features in tomato RILs.DNA research : an international journal for rapid publication of reports on genes and genomes · 2017
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 3 countries.

Cyrille SaintenacUMR 1095, Genetics, Diversity and Ecophysiology of Cereals, INRA-UBP, Domaine de Crouël, 234 Avenue du Brézet, Clermont-Ferrand, 63100, France.
Sébastien Faure
Arnaud Remay
Frédéric Choulet
Catherine Ravel
Etienne Paux
François Balfourier
Catherine Feuillet
Pierre Sourdille
Génétique, Diversité, Écophysiologie des Céréales · FRInstitut National de la Recherche Agronomique · MAKansas State University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In bread wheat (Triticum aestivum L.), initial studies using deletion lines indicated that crossover (CO) events occur mainly in the telomeric regions of the chromosomes with a possible correlation with the presence of genes. However, little is known about the distribution of COs at the sequence level. To investigate this, we studied in detail the pattern of COs along a contig of 3.110 Mb using two F2 segregating populations (Chinese Spring × Renan (F2-CsRe) and Chinese Spring × Courtot (F2-CsCt)) each containing ~2,000 individuals. The availability of the sequence of the contig from Cs enabled the development of 318 markers among which 23 co-dominant polymorphic markers (11 SSRs and 12 SNPs) were selected for CO distribution analyses. The distribution of CO events was not homogeneous throughout the contig, ranging from 0.05 to 2.77 cM/Mb, but was conserved between the two populations despite very different contig recombination rate averages (0.82 cM/Mb in F2-CsRe vs 0.35 cM/Mb in F2-CsCt). The CO frequency was correlated with the percentage of coding sequence in Cs and with the polymorphism rate between Cs and Re or Ct in both populations, indicating an impact of these two factors on CO distribution. At a finer scale, COs were found in a region covering 2.38 kb, spanning a gene coding for a glycosyl transferase (Hga3), suggesting the presence of a CO hotspot. A non-crossover event covering at least 453 bp was also identified in the same interval. From these results, we can conclude that gene content could be one of the factors driving recombination in bread wheat.

Indexed as

Crossing Over, GeneticMeiosisRecombination, GeneticChromosome MappingChromosomes, PlantPolymorphism, Single NucleotideTriticum

Identifiers

PMID21161258
OpenAlexW2048908894

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.