Evidence map›Paper›PMID 21159875›Full record

ArticleJournal of virology2011

The capacity of UL49.5 proteins to inhibit TAP is widely distributed among members of the genus Varicellovirus.

Marieke C Verweij, Andrea D Lipinska, Danijela Koppers-Lalic, Wouter F van Leeuwen, Jeffrey I Cohen, Paul R Kinchington, Ilhem Messaoudi, Krystyna Bienkowska-Szewczyk, Maaike E Ressing, Frans A M Rijsewijk and 1 more

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 37 citations in OpenAlex.

  1. Structurally diverse viral inhibitors converge on a shared mechanism to stall the antigen transporter TAP.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  2. A Structural Atlas of TAP Inhibition by Herpesviruses and Poxviruses.bioRxiv : the preprint server for biology · 2025
    Article
  3. Review
  4. Article
  5. The herpesvirus UL49.5 protein hijacks a cellular C-degron pathway to drive TAP transporter degradation.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  6. Article
  7. Article
  8. Modulation of MHC and MHC-Like Molecules by Varicella Zoster Virus.Current topics in microbiology and immunology · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 8 institutions in 4 countries.

Marieke C VerweijDepartment of Medical Microbiology, University Medical Center Utrecht, 3584 CX Utrecht, Netherlands.
Andrea D Lipinska
Danijela Koppers-Lalic
Wouter F van Leeuwen
Jeffrey I Cohen
Paul R Kinchington
Ilhem Messaoudi
Krystyna Bienkowska-Szewczyk
Maaike E Ressing
Frans A M Rijsewijk
Emmanuel J H J Wiertz
Leiden University Medical Center · NLUniversity of Gdańsk · PLUtrecht University · NLNational Institute of Allergy and Infectious Diseases · USOregon Health & Science University · USUniversidade Federal do Rio Grande do Sul · BRUniversity Medical Center Utrecht · NLUniversity of Pittsburgh · US

Funding

Virus Production and Manipulation of Protein/Gene Expression ModuleP30EY008098 · NEI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Ethan A Rossi · 1989 to 2026
$17.8M
Molecular Biology Of Varicella Zoster Virus InfectionZIAAI000430 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI COHEN, JEFFREY · 2009 to 2025
$4.5M
Varicella zoster virus-Induced Pain in a Rat Model of Post-Herpetic NeuralgiaR01NS064022 · NINDS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KINCHINGTON, PAUL R. · 2009 to 2019
$3.6M
Impact of immune senescence on herpes zoster in a nonhuman primate modelR01AG037042 · NIA · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI MESSAOUDI, ILHEM · 2010 to 2014
$2.3M
Varicella zoster virus-Induced Pain in a Rat Model of Post-Herpetic NeuralgiaR56NS064022 · NINDS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KINCHINGTON, PAUL R. · 2015 to 2015
$532k
Intramural NIH HHSNEI NIH HHS EY08098NEI NIH HHS P30 EY008098NIA NIH HHS R01 AG037042NIA NIH HHS R01 AG037042-01NINDS NIH HHS NS064022NINDS NIH HHS R01 NS064022NINDS NIH HHS R56 NS064022
6 · The paper itself

Abstract

The lifelong infection by varicelloviruses is characterized by a fine balance between the host immune response and immune evasion strategies used by these viruses. Virus-derived peptides are presented to cytotoxic T lymphocytes by major histocompatibility complex (MHC) class I molecules. The transporter associated with antigen processing (TAP) transports the peptides from the cytosol into the endoplasmic reticulum, where the loading of MHC-I molecules occurs. The varicelloviruses bovine herpesvirus 1 (BoHV-1), pseudorabies virus, and equid herpesviruses 1 and 4 have been found to encode a UL49.5 protein that inhibits TAP-mediated peptide transport. To investigate to what extent UL49.5-mediated TAP inhibition is conserved within the family of Alphaherpesvirinae, the homologs of another five varicelloviruses, one mardivirus, and one iltovirus were studied. The UL49.5 proteins of BoHV-5, bubaline herpesvirus 1, cervid herpesvirus 1, and felid herpesvirus 1 were identified as potent TAP inhibitors. The varicella-zoster virus and simian varicellovirus UL49.5 proteins fail to block TAP; this is not due to the absence of viral cofactors that might assist in this process, since cells infected with these viruses did not show reduced TAP function either. The UL49.5 homologs of the mardivirus Marek's disease virus 1 and the iltovirus infectious laryngotracheitis virus did not block TAP, suggesting that the capacity to inhibit TAP via UL49.5 has been acquired by varicelloviruses only. A phylogenetic analysis of viruses that inhibit TAP through their UL49.5 proteins reveals an interesting hereditary pattern, pointing toward the presence of this capacity in defined clades within the genus Varicellovirus.

Indexed as

Down-RegulationAmino Acid SequenceAnimalsATP-Binding Cassette TransportersCattleCattle DiseasesCell LineHerpesviridae InfectionsHerpesvirus 1, BovineHumansMolecular Sequence DataPhylogenySequence AlignmentVaricellovirusViral Envelope ProteinsATP-Binding Cassette Transporterstransporter associated with antigen processing (TAP)UL49.5 protein, bovine herpesvirus type 1Viral Envelope Proteins

Identifiers

PMID21159875
PMCPMC3067808
OpenAlexW2128060969

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.