Evidence map›Paper›PMID 21157497›Full record

ArticleEuropean journal of human genetics : EJHG2011

Concurrent genetic alterations in DNA polymerase proofreading and mismatch repair in human colorectal cancer.

Rintaro Yoshida, Kaname Miyashita, Mayuko Inoue, Akiyoshi Shimamoto, Zhao Yan, Akinori Egashira, Eiji Oki, Yoshishiro Kakeji, Shinya Oda, Yoshihiko Maehara

Open access · bronzeAbstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 67 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. POLE/POLD1 mutation and tumor immunotherapy.Journal of experimental & clinical cancer research : CR · 2022
    Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. OncoTargets and therapy · 2020
    Article
  14. Review
  15. Risk of colorectal cancer for carriers of a germ-line mutation in POLE or POLD1.Genetics in medicine : official journal of the American College of Medical Genetics · 2018
    Article
  16. Article
  17. Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Rintaro YoshidaDepartment of Surgery and Science, Graduate School of Medical Sciences, Kyushu University, Fukuoka, Japan.
Kaname Miyashita
Mayuko Inoue
Akiyoshi Shimamoto
Zhao Yan
Akinori Egashira
Eiji Oki
Yoshishiro Kakeji
Shinya Oda
Yoshihiko Maehara
Kyushu University · JPNational Hospital Organization Kyushu Cancer Center · JPLiaoning Cancer Hospital & Institute · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genomic sequences encoding the 3' exonuclease (proofreading) domains of both replicative DNA polymerases, pol delta and pol epsilon, were explored simultaneously in human colorectal carcinomas including six established cell lines. Three unequivocal sequence alterations, including one previously reported, were found, and all these were considered as dysfunctional mutations in light of the local amino-acid sequences. In particular, the F367S mutation found in the POLE gene encoding the pol epsilon catalytic subunit, which includes the proofreading domain, is the first found in human diseases. Surprisingly, the tumours carrying these proofreading domain mutations were all defective in DNA mismatch repair (MMR). In addition to the two cell lines with acknowledged MMR gene mutations, the third tumour was also demonstrated to harbour a distinct mutation in MLH1, and indeed exhibited a microsatellite-unstable phenotype. These findings suggest that, in concert with MMR deficiency, defective polymerase proofreading may also contribute to the mutator phenotype observed in human colorectal cancer. Our observations may suggest previously unrecognised complexities in the molecular abnormalities underlying the mutator phenotype in human neoplasms.

Indexed as

DNA Mismatch RepairMutationAdaptor Proteins, Signal TransducingAmino Acid SequenceColorectal NeoplasmsDNA Polymerase IIDNA Polymerase IIIDNA ReplicationExonucleasesFemaleHCT116 CellsHT29 CellsHumansMaleMicrosatellite InstabilityMiddle AgedAdaptor Proteins, Signal TransducingDNA Polymerase IIDNA Polymerase IIIExonucleasesMLH1 protein, humanMutL Protein Homolog 1Nuclear ProteinsPOLE protein, humanPoly-ADP-Ribose Binding Proteinsspleen exonuclease

Identifiers

PMID21157497
PMCPMC3061989
OpenAlexW2067554778

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.