Evidence map›Paper›PMID 21157429›Full record

ArticleThe EMBO journal2011

Epigenetic engineering shows H3K4me2 is required for HJURP targeting and CENP-A assembly on a synthetic human kinetochore.

Jan H Bergmann, Mariluz Gómez Rodríguez, Nuno M C Martins, Hiroshi Kimura, David A Kelly, Hiroshi Masumoto, Vladimir Larionov, Lars E T Jansen, William C Earnshaw

Open access · greenAbstract read
In one paragraph

Article in The EMBO journal, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 195 papers.

0numbers the graph read from it
0cells of the map it votes in
195citing papers in PubMed
10.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

195 citing papers in PubMed, 299 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. The dynamic centromere.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2025
    Review
  6. Preserving centromere identity: right amounts of CENP-A at the right place and time.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2025
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. DNA strand breaks at centromeres: Friend or foe?Seminars in cell & developmental biology · 2024
    Review
  16. Article
  17. SETD2 safeguards the genome against isochromosome formation.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  18. Review
  19. Compromised Mitotic Fidelity in Human Pluripotent Stem Cells.International journal of molecular sciences · 2023
    Review
  20. Article

135 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 4 countries.

Jan H BergmannWellcome Trust Centre for Cell Biology, University of Edinburgh, Edinburgh, Scotland, UK.
Mariluz Gómez Rodríguez
Nuno M C Martins
Hiroshi Kimura
David A Kelly
Hiroshi Masumoto
Vladimir Larionov
Lars E T Jansen
William C Earnshaw
University of Edinburgh · GBInstituto Gulbenkian de Ciência · PTKazusa DNA Research Institute · JPNational Institutes of Health · USOsaka University · JPWellcome Centre for Cell Biology · GB

Funding

Study of hereditary prostate cancer and human artificial chromosomesZIABC010413 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI LARIONOV, VLADIMIR · 2009 to 2025
$31.5M
Intramural NIH HHSWellcome Trust 073915
6 · The paper itself

Abstract

Kinetochores assemble on distinct 'centrochromatin' containing the histone H3 variant CENP-A and interspersed nucleosomes dimethylated on H3K4 (H3K4me2). Little is known about how the chromatin environment at active centromeres governs centromeric structure and function. Here, we report that centrochromatin resembles K4-K36 domains found in the body of some actively transcribed housekeeping genes. By tethering the lysine-specific demethylase 1 (LSD1), we specifically depleted H3K4me2, a modification thought to have a role in transcriptional memory, from the kinetochore of a synthetic human artificial chromosome (HAC). H3K4me2 depletion caused kinetochores to suffer a rapid loss of transcription of the underlying α-satellite DNA and to no longer efficiently recruit HJURP, the CENP-A chaperone. Kinetochores depleted of H3K4me2 remained functional in the short term, but were defective in incorporation of CENP-A, and were gradually inactivated. Our data provide a functional link between the centromeric chromatin, α-satellite transcription, maintenance of CENP-A levels and kinetochore stability.

Indexed as

AutoantigensCentromereCentromere Protein AChromatinChromatin ImmunoprecipitationChromosomal Proteins, Non-HistoneChromosomes, Artificial, HumanDNA-Binding ProteinsDNA PrimersEpigenesis, GeneticGenetic EngineeringHistonesHumansKinetochoresNucleosomesReverse Transcriptase Polymerase Chain ReactionAutoantigensCENPA protein, humanCentromere Protein AChromatinChromosomal Proteins, Non-HistoneDNA-Binding ProteinsDNA PrimersHistonesHJURP protein, humanNucleosomes

Identifiers

PMID21157429
PMCPMC3025471
OpenAlexW1878784702

What OpenQuestion holds

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LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.