Evidence map›Paper›PMID 21153862›Full record

ArticlePlant molecular biology2011

Differences in gene expression amplitude overlie a conserved transcriptomic program occurring between the rapid and potent localized resistant reaction at the syncytium of the Glycine max genotype Peking (PI 548402) as compared to the prolonged and potent resistant reaction of PI 88788.

Vincent P Klink, Parsa Hosseini, Prachi D Matsye, Nadim W Alkharouf, Benjamin F Matthews

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Article in Plant molecular biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

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20citing papers in PubMed
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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Article
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  3. Genetic Variation amongInternational journal of molecular sciences · 2023
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  6. Frontiers in plant science · 2022
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  8. Physiology and molecular biology of plants : an international journal of functional plant biology · 2020
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  9. Article
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  11. Frontiers in microbiology · 2017
    Article
  12. Article
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  15. Article
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  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Vincent P KlinkDepartment of Biological Sciences, Harned Hall, Mississippi State University, Mississippi State, MS 39762, USA. vklink@biology.msstate.edu
Parsa Hosseini
Prachi D Matsye
Nadim W Alkharouf
Benjamin F Matthews

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glycine max L. Merr. (soybean) resistance to Heterodera glycines Ichinohe occurs at the site of infection, a nurse cell known as the syncytium. Resistance is classified into two cytologically-defined responses, the G. max ([Peking])- and G. max ([PI 88788])-types. Each type represents a cohort of G. max genotypes. Resistance in G. max ([Peking]) occurs by a potent and rapid localized response, affecting parasitic second stage juveniles (p-J2). In contrast, resistance occurs by a potent but more prolonged reaction in the genotype G. max ([PI 88788]) that affects nematode development at the J3 and J4 stages. Microarray analyses comparing these cytologically and developmentally distinct resistant reactions reveal differences in gene expression in pericycle and surrounding cells even before infection. The differences include higher relative levels of the differentially expressed in response to arachidonic acid 1 gene (DEA1 [Gm-DEA1]) (+224.19-fold) and a protease inhibitor (+68.28-fold) in G. max ([Peking/PI 548402]) as compared to G. max ([PI 88788]). Gene pathway analyses compare the two genotypes (1) before, (2) at various times during, (3) constitutively throughout the resistant reaction and (4) at all time points prior to and during the resistant reaction. The amplified levels of transcriptional activity of defense genes may explain the rapid and potent reaction in G. max ([Peking/PI 548402]) as compared to G. max ([PI 88788]). In contrast, the shared differential expression levels of genes in G. max ([Peking/PI 548402]) and G. max ([PI 88788]) may indicate a conserved genomic program underlying the G. max resistance on which the genotype-specific gene expression programs are built off.

Indexed as

Gene Expression ProfilingGene Expression Regulation, PlantAnimalsGenotypeGiant CellsGlycine maxHost-Parasite InteractionsImmunity, InnateOligonucleotide Array Sequence AnalysisPlant DiseasesPlant ProteinsSpecies SpecificityTime FactorsTylenchoideaPlant Proteins

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.