Evidence map›Paper›PMID 21150900›Full record

ArticleNature2011

Distributed biological computation with multicellular engineered networks.

Sergi Regot, Javier Macia, Núria Conde, Kentaro Furukawa, Jimmy Kjellén, Tom Peeters, Stefan Hohmann, Eulàlia de Nadal, Francesc Posas, Ricard Solé

Abstract read
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In one paragraph

Article in Nature, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 147 papers.

0numbers the graph read from it
0cells of the map it votes in
147citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

147 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Gene circuit-based sensors.Fundamental research · 2025
    Review
  5. Why cellular computations challenge our design principles.Seminars in cell & developmental biology · 2025
    Review
  6. Article
  7. Dynamic Transcription Machineries in Protocells.Journal of the American Chemical Society · 2025
    Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Open problems in synthetic multicellularity.NPJ systems biology and applications · 2024
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Review

87 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Sergi RegotCell signaling unit, Departament de Ciències Experimentals i de la Salut, Universitat Pompeu Fabra (UPF), E-08003 Barcelona, Spain.
Javier Macia
Núria Conde
Kentaro Furukawa
Jimmy Kjellén
Tom Peeters
Stefan Hohmann
Eulàlia de Nadal
Francesc Posas
Ricard Solé

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ongoing efforts within synthetic and systems biology have been directed towards the building of artificial computational devices using engineered biological units as basic building blocks. Such efforts, inspired in the standard design of electronic circuits, are limited by the difficulties arising from wiring the basic computational units (logic gates) through the appropriate connections, each one to be implemented by a different molecule. Here, we show that there is a logically different form of implementing complex Boolean logic computations that reduces wiring constraints thanks to a redundant distribution of the desired output among engineered cells. A practical implementation is presented using a library of engineered yeast cells, which can be combined in multiple ways. Each construct defines a logic function and combining cells and their connections allow building more complex synthetic devices. As a proof of principle, we have implemented many logic functions by using just a few engineered cells. Of note, small modifications and combination of those cells allowed for implementing more complex circuits such as a multiplexer or a 1-bit adder with carry, showing the great potential for re-utilization of small parts of the circuit. Our results support the approach of using cellular consortia as an efficient way of engineering complex tasks not easily solvable using single-cell implementations.

Indexed as

BioengineeringLogicModels, BiologicalCandida albicansCell CompartmentationColony Count, MicrobialDoxycyclineEstradiolGalactoseMating FactorPeptidesPheromonesSaccharomyces cerevisiaeSodium ChlorideSystems BiologyDoxycyclineEstradiolGalactoseMating FactorPeptidesPheromonesSodium Chloride

Identifiers

PMID21150900

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.