Evidence map›Paper›PMID 21148632›Full record

ArticleMolecular & cellular proteomics : MCP2011

Novel oxidative modifications in redox-active cysteine residues.

Jaeho Jeong, Yongsik Jung, Seungjin Na, Jihye Jeong, Eunsun Lee, Mi-Sun Kim, Sun Choi, Dong-Hae Shin, Eunok Paek, Hee-Yoon Lee and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 93 citations in OpenAlex.

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  13. Mechanism of GAPDH Redox Signaling by HInternational journal of molecular sciences · 2022
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  16. Emerging Role of the Inflammasome and Pyroptosis in Hypertension.International journal of molecular sciences · 2021
    Review
  17. Article
  18. Review
  19. Ionizing Radiation-induced Proteomic Oxidation inMolecular & cellular proteomics : MCP · 2020
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Jaeho JeongThe Center for Cell Signaling & Drug Discovery Research, College of Pharmacy, Division of Life & Pharmaceutical Sciences, Department of Bioinspired Science, Ewha Womans University, Seoul, Korea 120-750.
Yongsik Jung
Seungjin Na
Jihye Jeong
Eunsun Lee
Mi-Sun Kim
Sun Choi
Dong-Hae Shin
Eunok Paek
Hee-Yoon Lee
Kong-Joo Lee
Ewha Womans University · KRKorea Advanced Institute of Science and Technology · KRSeoul National University · KRUniversity of Seoul · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Redox-active cysteine, a highly reactive sulfhydryl, is one of the major targets of ROS. Formation of disulfide bonds and other oxidative derivatives of cysteine including sulfenic, sulfinic, and sulfonic acids, regulates the biological function of various proteins. We identified novel low-abundant cysteine modifications in cellular GAPDH purified on 2-dimensional gel electrophoresis (2D-PAGE) by employing selectively excluded mass screening analysis for nano ultraperformance liquid chromatography-electrospray-quadrupole-time of flight tandem mass spectrometry, in conjunction with MODi and MODmap algorithm. We observed unexpected mass shifts (Δm=-16, -34, +64, +87, and +103 Da) at redox-active cysteine residue in cellular GAPDH purified on 2D-PAGE, in oxidized NDP kinase A, peroxiredoxin 6, and in various mitochondrial proteins. Mass differences of -16, -34, and +64 Da are presumed to reflect the conversion of cysteine to serine, dehydroalanine (DHA), and Cys-SO2-SH respectively. To determine the plausible pathways to the formation of these products, we prepared model compounds and examined the hydrolysis and hydration of thiosulfonate (Cys-S-SO2-Cys) either to DHA (Δm=-34 Da) or serine along with Cys-SO2-SH (Δm=+64 Da). We also detected acrylamide adducts of sulfenic and sulfinic acids (+87 and +103 Da). These findings suggest that oxidations take place at redox-active cysteine residues in cellular proteins, with the formation of thiosulfonate, Cys-SO2-SH, and DHA, and conversion of cysteine to serine, in addition to sulfenic, sulfinic and sulfonic acids of reactive cysteine.

Indexed as

Protein Processing, Post-TranslationalAlanineAmino Acid SequenceAnimalsCatalytic DomainCysteineGlyceraldehyde-3-Phosphate Dehydrogenase (Phosphorylating)HEK293 CellsHumansMass SpectrometryMiceMitochondrial ProteinsMolecular Sequence DataMutant ProteinsNucleoside-Diphosphate KinaseOxidation-ReductionAlanineCysteinedehydroalanineGlyceraldehyde-3-Phosphate Dehydrogenase (Phosphorylating)Mitochondrial ProteinsMutant ProteinsNucleoside-Diphosphate KinasePeptidesPeroxiredoxin VIPrdx6 protein, mouseRecombinant ProteinsSerineSulfenic AcidsSulfinic Acids

Identifiers

PMID21148632
PMCPMC3047142
OpenAlexW2038607344

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.