Evidence map›Paper›PMID 21143966›Full record

ArticleBMC infectious diseases2010

Detection of multiple strains of Mycobacterium tuberculosis using MIRU-VNTR in patients with pulmonary tuberculosis in Kampala, Uganda.

Katherine R Dickman, Lydia Nabyonga, David P Kateete, Fred A Katabazi, Benon B Asiimwe, Harriet K Mayanja, Alphonse Okwera, Christopher Whalen, Moses L Joloba

Open access · goldAbstract read
In one paragraph

Article in BMC infectious diseases, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed, 2 pooled it
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 2 syntheses or guidelines pooled it, 46 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
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  11. Effect of mixed strain infections on clinical and epidemiological features of tuberculosis in Florida.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2021
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  15. Molecular clustering of patients withJournal of clinical tuberculosis and other mycobacterial diseases · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Katherine R DickmanDepartment of Pediatrics, Boston Medical Center, Boston University, Boston, USA.
Lydia Nabyonga
David P Kateete
Fred A Katabazi
Benon B Asiimwe
Harriet K Mayanja
Alphonse Okwera
Christopher Whalen
Moses L Joloba
Makerere University · UGBoston Medical Center · USMulago Hospital · UGUniversity of Georgia · US

Funding

TRAINING IN HIV-RELATED MALIGNANCIESD43TW000011 · FIC · CASE WESTERN RESERVE UNIVERSITY · PI WHALEN, CHRISTOPHER C. · 1988 to 2012
$10.9M
Tuberculosis Prevention Research Unit /TBRU/-266095383N01AI095383 · NIAID · CASE WESTERN RESERVE UNIVERSITY · 2000 to 2005
$5.6M
CELL TO CELL SIGNALING IN MYCOBACTERIAR01AI075637 · NIAID · MAKERERE UNIVERSITY COLLEGE OF HEALTH SCIENCES · PI JOLOBA, MOSES LUTAAKOME · 2007 to 2010
$319k
FIC NIH HHS D43-TW000011Howard Hughes Medical InstituteNIAID NIH HHS N01-AI-70022NIAID NIH HHS N01-AI-95383NIAID NIH HHS R01 AI075637NIAID NIH HHS R01 AI075637-01PHS HHS HHSN266200700022CPHS HHS SR01A1075637-4PHS HHS U2RTW006879
6 · The paper itself

Abstract

backgroundMany studies using DNA fingerprinting to differentiate Mycobacterium tuberculosis (MTB) strains reveal single strains in cultures, suggesting that most disease is caused by infection with a single strain. However, recent studies using molecular epidemiological tools that amplify multiple targets have demonstrated simultaneous infection with multiple strains of MTB. We aimed to determine the prevalence of MTB multiple strain infections in Kampala, and the impact of these infections on clinical presentation of tuberculosis (TB) and response to treatment.

methodsA total of 113 consecutive smear and culture positive patients who previously enrolled in a house-hold contact study were included in this study. To determine whether infection with multiple MTB strains has a clinical impact on the initial presentation of patients, retrospective patient data (baseline clinical, radiological and drug susceptibility profiles) was obtained. To determine presence of infections with multiple MTB strains, MIRU-VNTR (Mycobacterial Interspersed Repetitive Unit-Variable-Number Tandem Repeats) -PCR was performed on genomic DNA extracted from MTB cultures of smear positive sputum samples at baseline, second and fifth months.

resultsOf 113 patients, eight (7.1%) had infection with multiple MTB strains, coupled with a high rate of HIV infection (37.5% versus 12.6%, p = 0.049). The remaining patients (105) were infected with single MTB strains. The proportions of patients with MTB smear positive cultures after two and five months of treatment were similar. There was no difference between the two groups for other variables.

conclusionInfection with multiple MTB strains occurs among patients with first episode of pulmonary tuberculosis in Kampala, in a setting with high TB incidence. Infection with multiple MTB strains had little impact on the clinical course for individual patients. This is the first MIRU-VNTR-based study from in an East African country.

Indexed as

Minisatellite RepeatsAdultBacterial Typing TechniquesDNA, BacterialFemaleHumansMaleMolecular EpidemiologyMycobacterium tuberculosisPrevalenceSequence Analysis, DNATuberculosis, PulmonaryUgandaDNA, Bacterial

Identifiers

PMID21143966
PMCPMC3004912
OpenAlexW2139994589

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.