Evidence map›Paper›PMID 21143964›Full record

ArticleProteome science2010

Proteomic profiling of proteins associated with the rejuvenation of Sequoia sempervirens (D. Don) Endl.

Ing-Feng Chang, Peng-Jen Chen, Chin-Hui Shen, Tsung-Ju Hsieh, Ya-Wen Hsu, Bau-Lian Huang, Ching-I Kuo, Yu-Ting Chen, Hsiu-An Chu, Kai-Wun Yeh and 1 more

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Article in Proteome science, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Ing-Feng Chang *Institute of Plant Biology, National Taiwan University, Taipei 106, Taiwan.
Peng-Jen Chen *Institute of Plant Biology, National Taiwan University, Taipei 106, Taiwan.
Chin-Hui Shen *Institute of Plant Biology, National Taiwan University, Taipei 106, Taiwan.
Tsung-Ju HsiehInstitute of Plant Biology, National Taiwan University, Taipei 106, Taiwan.
Ya-Wen HsuInstitute of Plant Biology, National Taiwan University, Taipei 106, Taiwan.
Bau-Lian HuangInstitute of Plant and Microbial Biology, Academia Sinica, Taipei, Taiwan.
Ching-I KuoInstitute of Plant and Microbial Biology, Academia Sinica, Taipei, Taiwan.
Yu-Ting ChenInstitute of Genomics and Bioinformatics, National Chung Hsing University, Taichung, Taiwan.
Hsiu-An ChuInstitute of Plant and Microbial Biology, Academia Sinica, Taipei, Taiwan.
Kai-Wun YehInstitute of Plant Biology, National Taiwan University, Taipei 106, Taiwan.
Li-Chun HuangInstitute of Plant and Microbial Biology, Academia Sinica, Taipei, Taiwan.
National Taiwan University · TWInstitute of Plant and Microbial Biology, Academia Sinica · TWNational Chung Hsing University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRestoration of rooting competence is important for rejuvenation in Sequoia sempervirens (D. Don) Endl and is achieved by repeatedly grafting Sequoia shoots after 16 and 30 years of cultivation in vitro.

resultsMass spectrometry-based proteomic analysis revealed three proteins that differentially accumulated in different rejuvenation stages, including oxygen-evolving enhancer protein 2 (OEE2), glycine-rich RNA-binding protein (RNP), and a thaumatin-like protein. OEE2 was found to be phosphorylated and a phosphopeptide (YEDNFDGNSNVSVMVpTPpTDK) was identified. Specifically, the protein levels of OEE2 increased as a result of grafting and displayed a higher abundance in plants during the juvenile and rejuvenated stages. Additionally, SsOEE2 displayed the highest expression levels in Sequoia shoots during the juvenile stage and less expression during the adult stage. The expression levels also steadily increased during grafting.

conclusionOur results indicate a positive correlation between the gene and protein expression patterns of SsOEE2 and the rejuvenation process, suggesting that this gene is involved in the rejuvenation of Sequoia sempervirens.

Identifiers

PMID21143964
PMCPMC3022872
OpenAlexW2149323131

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.