Evidence map›Paper›PMID 21143209›Full record

ArticleBioTechniques2010

Detection of protein-protein interactions using nonimmune IgG and BirA-mediated biotinylation.

Cai Huang, Ken Jacobson

Open access · goldAbstract read
In one paragraph

Article in BioTechniques, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Cdk5-mediated phosphorylation regulates phosphatidylinositol 4-phosphate 5-kinase type I γ 90 activity and cell invasion.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Cai HuangDepartment of Cell and Developmental Biology, University of North Carolina, Chapel Hill, NC, USA. cai-huang@uky.edu
Ken Jacobson
UNC Lineberger Comprehensive Cancer CenterUniversity of Kentucky · US

Funding

STRUCTUREU54GM064346 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI IMPERIALI, BARBARA · 2001 to 2010
$74.9M
Role of talin phosphorylation in cardiovascular biologyF32HL083215 · NHLBI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI HUANG, CAI · 2005 to 2007
$124k
NHLBI NIH HHS F32 HL083215NIGMS NIH HHS GM64346NIGMS NIH HHS U54 GM064346
6 · The paper itself

Abstract

Detection of protein-protein interactions in cells is crucial for understanding the biological functions of proteins, including their roles in signal transduction. However, current methods require specific antibodies both for immunoprecipitation and detection, making them expensive and sometimes unreliable. Here we describe protocols for protein-protein interaction assays that use nonimmune IgG-conjugated Sepharose to precipitate the IgG binding domain (ZZ) fused to the bait protein; the interaction partner is fused to Avitag and biotinylated by BirA so that it can be detected by a one-step blot with Dylight 680 streptavidin to detect the Avitag fusion protein. Since this method does not require specific antibodies and is inexpensive, sensitive, and reliable, it should be useful for detecting protein-protein interactions in cells.

Indexed as

AnimalsBiotinylationCarbon-Nitrogen LigasesChemical PrecipitationCHO CellsCricetinaeCricetulusElectrophoresis, Polyacrylamide GelEscherichia coli ProteinsGlutathioneGlutathione TransferaseGreen Fluorescent ProteinsImmunoglobulin GProtein Interaction MappingRecombinant Fusion ProteinsRepressor ProteinsbirA protein, E coliCarbon-Nitrogen Ligasesenhanced green fluorescent proteinEscherichia coli ProteinsGlutathioneGlutathione TransferaseGreen Fluorescent ProteinsImmunoglobulin GRecombinant Fusion ProteinsRepressor Proteins

Identifiers

PMID21143209
PMCPMC4441393
OpenAlexW1995470350

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.