Evidence map›Paper›PMID 21139080›Full record

ArticleBlood2011

GABP controls a critical transcription regulatory module that is essential for maintenance and differentiation of hematopoietic stem/progenitor cells.

Shuyang Yu, Kairong Cui, Raja Jothi, Dong-Mei Zhao, Xuefang Jing, Keji Zhao, Hai-Hui Xue

Open access · bronzeAbstract readValidation Study
In one paragraph

Article in Blood, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 81 citations in OpenAlex.

  1. Article
  2. Review
  3. GABPα inhibits tumor progression and angiogenesis via a novel 18-bp indel withinCancer biomarkers : section A of Disease markers · 2024
    Article
  4. Article
  5. Aberrant stem cell and developmental programs in pediatric leukemia.Frontiers in cell and developmental biology · 2024
    Review
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
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  15. Article
  16. Article
  17. Article
  18. Neogenin-1 distinguishes between myeloid-biased and balancedProceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Shuyang YuDepartment of Microbiology, Carver College of Medicine, University of Iowa, Iowa City, IA, USA.
Kairong Cui
Raja Jothi
Dong-Mei Zhao
Xuefang Jing
Keji Zhao
Hai-Hui Xue
University of Iowa · USNational Heart Lung and Blood Institute · USNational Institute of Environmental Health Sciences · USNational Institutes of Health · US

Funding

Gene regulatory elements, networks, and mechanismsZIAES102625 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI JOTHI, RAJA · 2009 to 2025
$27.4M
Genome-wide mapping of histone modificationsZIAHL005801 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI ZHAO, KEJI · 2009 to 2025
$24.0M
Epigenetic Regulation of Hematopoietic Stem CellsZIAHL006031 · NHLBI · NATIONAL HEART, LUNG, AND BLOOD INSTITUTE · PI ZHAO, KEJI · 2009 to 2025
$16.6M
Regulation of primary and secondary CD4 and CD8 T cell memoryR37AI042767 · NIAID · UNIVERSITY OF IOWA · PI HARTY, JOHN T · 2008 to 2017
$4.7M
T resident memory in the lungR01AI042767 · NIAID · UNIVERSITY OF IOWA · PI HARTY, JOHN T · 1998 to 2023
$4.4M
Critical roles of GA binding protein in HSC maintenance and ageingR01HL095540 · NHLBI · UNIVERSITY OF IOWA · PI XUE, HAI-HUI · 2009 to 2013
$1.8M
CD8+ T Cell effector mechanisms against L. monocytogenesR21AI042767 · NIAID · UNIVERSITY OF IOWA · PI HARTY, JOHN T. · 2002 to 2002
$331k
Intramural NIH HHS ZIA ES102625NHLBI NIH HHS HL095540NHLBI NIH HHS R01 HL095540NIAID NIH HHS AI042767NIAID NIH HHS R01 AI042767NIAID NIH HHS R21 AI042767NIAID NIH HHS R37 AI042767PHS HHS 1ZIAES102625-01
6 · The paper itself

Abstract

Maintaining a steady pool of self-renewing hematopoietic stem cells (HSCs) is critical for sustained production of multiple blood lineages. Many transcription factors and molecules involved in chromatin and epigenetic modifications have been found to be critical for HSC self-renewal and differentiation; however, their interplay is less understood. The transcription factor GA binding protein (GABP), consisting of DNA-binding subunit GABPα and transactivating subunit GABPβ, is essential for lymphopoiesis as shown in our previous studies. Here we demonstrate cell-intrinsic, absolute dependence on GABPα for maintenance and differentiation of hematopoietic stem/progenitor cells. Through genome-wide mapping of GABPα binding and transcriptomic analysis of GABPα-deficient HSCs, we identified Zfx and Etv6 transcription factors and prosurvival Bcl-2 family members including Bcl-2, Bcl-X(L), and Mcl-1 as direct GABP target genes, underlying its pivotal role in HSC survival. GABP also directly regulates Foxo3 and Pten and hence sustains HSC quiescence. Furthermore, GABP activates transcription of DNA methyltransferases and histone acetylases including p300, contributing to regulation of HSC self-renewal and differentiation. These systematic analyses revealed a GABP-controlled gene regulatory module that programs multiple aspects of HSC biology. Our studies thus constitute a critical first step in decoding how transcription factors are orchestrated to regulate maintenance and multipotency of HSCs.

Indexed as

AnimalsBinding SitesCell DifferentiationETS Translocation Variant 6 ProteinForkhead Box Protein O3Forkhead Transcription FactorsGA-Binding Protein Transcription FactorGene Expression ProfilingGene Expression Regulation, DevelopmentalGenome-Wide Association StudyHematopoiesisHematopoietic Stem CellsHumansKruppel-Like Transcription FactorsMiceMice, 129 StrainETS Translocation Variant 6 ProteinForkhead Box Protein O3Forkhead Transcription FactorsFoxO3 protein, mouseGA-Binding Protein Transcription FactorGabpa protein, mouseKruppel-Like Transcription FactorsProto-Oncogene Proteins c-bcl-2Proto-Oncogene Proteins c-etsPTEN PhosphohydrolasePten protein, mouseRepressor Proteinszinc finger protein, X-linked

Identifiers

PMID21139080
PMCPMC3062326
OpenAlexW2011571618

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.