Evidence map›Paper›PMID 21135205›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2010

Pathway analysis of Candida albicans survival and virulence determinants in a murine infection model.

Jeffrey M Becker, Sarah J Kauffman, Melinda Hauser, Liyin Huang, Molly Lin, Susan Sillaots, Bo Jiang, Deming Xu, Terry Roemer

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 76 papers.

0numbers the graph read from it
0cells of the map it votes in
76citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

76 citing papers in PubMed, 131 citations in OpenAlex.

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  6. MAIT cells: Conserved watchers on the wall.The Journal of experimental medicine · 2025
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  19. Downregulation of Essential Genes in the Fungal Pathogen Candida auris.Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  20. Review

16 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Jeffrey M BeckerDepartment of Microbiology, University of Tennessee, Knoxville, TN 37996, USA.
Sarah J Kauffman
Melinda Hauser
Liyin Huang
Molly Lin
Susan Sillaots
Bo Jiang
Deming Xu
Terry Roemer
Merck Canada Inc. (Canada) · CAUniversity of Tennessee at Knoxville · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

One potentially rich source of possible targets for antifungal therapy are those Candida albicans genes deemed essential for growth under the standard culture (i.e., in vitro) conditions; however, these genes are largely unexplored as drug targets because essential genes are not experimentally amenable to conventional gene deletion and virulence studies. Using tetracycline-regulatable promoter-based conditional mutants, we investigated a murine model of candidiasis in which repressing essential genes in the host was achieved. By adding doxycycline to the drinking water starting 3 days prior to (dox - 3D) or 2 days post (dox + 2D) infection, the phenotypic consequences of temporal gene inactivation were assessed by monitoring animal survival and fungal burden in prophylaxis and acute infection settings. Of 177 selected conditional shut-off strains tested, the virulence of 102 was blocked under both repressing conditions, suggesting that the corresponding genes are essential for growth and survival in a murine host across early and established infection periods. Among these genes were those previously identified as antifungal drug targets (i.e., FKS1, ERG1, and ERG11), verifying that this methodology can be used to validate potential new targets. We also identify genes either conditionally essential or dispensable for in vitro growth but required for survival and virulence, including those in late stage ergosterol synthesis, or early steps in fatty acid or riboflavin biosynthesis. This study evaluates the role of essential genes with respect to pathogen virulence in a large-scale, systems biology context, and provides a general method for gene target validation and for uncovering unexpected antimicrobial targets.

Indexed as

Microbial ViabilityAnimalsAnti-Bacterial AgentsAntifungal AgentsCandida albicansCandidiasisDisease Models, AnimalDoxycyclineDrug DesignErgosterolFatty AcidsFungal ProteinsGene Expression Regulation, FungalGenes, FungalMiceRiboflavinAnti-Bacterial AgentsAntifungal AgentsDoxycyclineErgosterolFatty AcidsFungal ProteinsRiboflavinVirulence Factors

Identifiers

PMID21135205
PMCPMC3009777
OpenAlexW2082150533

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.