Evidence map›Paper›PMID 21129728›Full record

ArticleAmerican journal of human genetics2010

Temtamy preaxial brachydactyly syndrome is caused by loss-of-function mutations in chondroitin synthase 1, a potential target of BMP signaling.

Yun Li, Kathrin Laue, Samia Temtamy, Mona Aglan, L Damla Kotan, Gökhan Yigit, Husniye Canan, Barbara Pawlik, Gudrun Nürnberg, Emma L Wakeling and 11 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
52citing papers in PubMed, 2 pooled it
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

52 citing papers in PubMed, 2 syntheses or guidelines pooled it, 94 citations in OpenAlex.

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  16. Fold-back mechanism originating inv-dup-del rearrangements in chromosomes 13 and 15.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 7 institutions in 5 countries.

Yun LiCenter for Molecular Medicine Cologne, University of Cologne, Germany.
Kathrin Laue
Samia Temtamy
Mona Aglan
L Damla Kotan
Gökhan Yigit
Husniye Canan
Barbara Pawlik
Gudrun Nürnberg
Emma L Wakeling
Oliver W Quarrell
Ingelore Baessmann
Matthew B Lanktree
Mustafa Yilmaz
Robert A Hegele
Khalda Amr
Klaus W May
Peter Nürnberg
A Kemal Topaloglu
Matthias Hammerschmidt
Bernd Wollnik
University of Cologne · DECukurova University · TRNational Research Centre · EGWestern University · CASheffield Children's Hospital · GBSoftware (Germany) · DEWessex Regional Genetics Laboratory · GB

Funding

Systematic Vertebrate Functional GenomicsR01GM063904 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI EKKER, STEPHEN CARL · 2001 to 2025
$10.7M
NIGMS NIH HHS 1R01 GM63904NIGMS NIH HHS R01 GM063904
6 · The paper itself

Abstract

Altered Bone Morphogenetic Protein (BMP) signaling leads to multiple developmental defects, including brachydactyly and deafness. Here we identify chondroitin synthase 1 (CHSY1) as a potential mediator of BMP effects. We show that loss of human CHSY1 function causes autosomal-recessive Temtamy preaxial brachydactyly syndrome (TPBS), mainly characterized by limb malformations, short stature, and hearing loss. After mapping the TPBS locus to chromosome 15q26-qterm, we identified causative mutations in five consanguineous TPBS families. In zebrafish, antisense-mediated chsy1 knockdown causes defects in multiple developmental processes, some of which are likely to also be causative in the etiology of TPBS. In the inner ears of zebrafish larvae, chsy1 is expressed similarly to the BMP inhibitor dan and in a complementary fashion to bmp2b. Furthermore, unrestricted Bmp2b signaling or loss of Dan activity leads to reduced chsy1 expression and, during epithelial morphogenesis, defects similar to those that occur upon Chsy1 inactivation, indicating that Bmp signaling affects inner-ear development by repressing chsy1. In addition, we obtained strikingly similar zebrafish phenotypes after chsy1 overexpression, which might explain why, in humans, brachydactyly can be caused by mutations leading either to loss or to gain of BMP signaling.

Indexed as

MutationSignal TransductionAnimalsBone Morphogenetic ProteinsBrachydactylyChromosome MappingChromosomes, Human, Pair 15Foot Deformities, CongenitalHand Deformities, CongenitalHumansN-AcetylgalactosaminyltransferasesSyndromeZebrafishBone Morphogenetic Proteinschondroitin synthaseN-Acetylgalactosaminyltransferases

Identifiers

PMID21129728
PMCPMC2997369
OpenAlexW2014787044

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.