Evidence map›Paper›PMID 21127203›Full record

ArticleCirculation. Cardiovascular genetics2011

Transforming growth factor-beta signaling pathway in patients with Kawasaki disease.

Chisato Shimizu, Sonia Jain, Sonia Davila, Martin L Hibberd, Kevin O Lin, Delaram Molkara, Jeffrey R Frazer, Shelly Sun, Annette L Baker, Jane W Newburger and 17 more

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Circulation. Cardiovascular genetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 93 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
93citing papers in PubMed, 2 pooled it
11.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

93 citing papers in PubMed, 2 syntheses or guidelines pooled it, 150 citations in OpenAlex.

  1. Pooled it
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  17. Article
  18. Markers of Endothelial Dysfunction in Kawasaki Disease: An Update.Clinical reviews in allergy & immunology · 2024
    Review
  19. Article
  20. Article

33 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

  • Erratum issued
    Davila, Sonia [removed]
5 · Who and what money

Authors and funding

27 authors at 1 institution in 1 country.

Chisato ShimizuUniversity of California and Rady Children's Hospital San Diego, San Diego, CA, USA.
Sonia Jain
Sonia Davila
Martin L Hibberd
Kevin O Lin
Delaram Molkara
Jeffrey R Frazer
Shelly Sun
Annette L Baker
Jane W Newburger
Anne H Rowley
Stanford T Shulman
Sonia Davila
David Burgner
Willemijn B Breunis
Taco W Kuijpers
Victoria J Wright
Michael Levin
Hariklia Eleftherohorinou
Lachlan Coin
Stephen J Popper
David A Relman
Wen Fury
Calvin Lin
Scott Mellis
Adriana H Tremoulet
Jane C Burns
Rady Children's Hospital-San Diego · US

Funding

iDASH: Integrating Data for Analysis, Anonymization, and SharingU54HL108460 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI OHNO-MACHADO, LUCILA · 2010 to 2015
$19.1M
Genetic Markers and gene expression in Kawasaki DiseaseR01HL069413 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BURNS, JANE C · 2002 to 2010
$5.5M
T35 Short Term Research Training GrantT35HL007491 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SAVOIA, MARIA CHRISTINA · 1985 to 2015
$2.8M
Matrix Metalloproteinases in Kawasaki DiseaseK24HL074864 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BURNS, JANE C · 2004 to 2008
$526k
Genetic influences and T-cell activation in Kawasaki DiseaseR21HL091494 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BURNS, JANE C · 2008 to 2009
$425k
NHLBI NIH HHS HL074864NHLBI NIH HHS HL091494NHLBI NIH HHS HL69413NHLBI NIH HHS K24 HL074864NHLBI NIH HHS R01 HL069413NHLBI NIH HHS R21 HL091494NHLBI NIH HHS T35 HL007491NHLBI NIH HHS T35 HL007491-28NHLBI NIH HHS U54 HL108460
6 · The paper itself

Abstract

backgroundTransforming growth factor (TGF)-β is a multifunctional peptide that is important in T-cell activation and cardiovascular remodeling, both of which are important features of Kawasaki disease (KD). We postulated that variation in TGF-β signaling might be important in KD susceptibility and disease outcome. METHODS AND

resultsWe investigated genetic variation in 15 genes belonging to the TGF-β pathway in a total of 771 KD subjects of mainly European descent from the United States, the United Kingdom, Australia, and the Netherlands. We analyzed transcript abundance patterns using microarray and reverse transcriptase-polymerase chain reaction for these same genes, and measured TGF-β2 protein levels in plasma. Genetic variants in TGFB2, TGFBR2, and SMAD3 and their haplotypes were consistently and reproducibly associated with KD susceptibility, coronary artery aneurysm formation, aortic root dilatation, and intravenous immunoglobulin treatment response in different cohorts. A SMAD3 haplotype associated with KD susceptibility replicated in 2 independent cohorts and an intronic single nucleotide polymorphism in a separate haplotype block was also strongly associated (A/G, rs4776338) (P=0.000022; odds ratio, 1.50; 95% confidence interval, 1.25 to 1.81). Pathway analysis using all 15 genes further confirmed the importance of the TGF-β pathway in KD pathogenesis. Whole-blood transcript abundance for these genes and TGF-β2 plasma protein levels changed dynamically over the course of the illness.

conclusionsThese studies suggest that genetic variation in the TGF-β pathway influences KD susceptibility, disease outcome, and response to therapy, and that aortic root and coronary artery Z scores can be used for phenotype/genotype analyses. Analysis of transcript abundance and protein levels further support the importance of this pathway in KD pathogenesis.

Indexed as

AortaAustraliaCohort StudiesCoronary VesselsGenetic Predisposition to DiseaseHaplotypesHumansImmunoglobulins, IntravenousLinkage DisequilibriumMucocutaneous Lymph Node SyndromePhenotypePolymorphism, Single NucleotideProtein Serine-Threonine KinasesReceptors, Transforming Growth Factor betaReceptor, Transforming Growth Factor-beta Type IIRNA, MessengerImmunoglobulins, IntravenousProtein Serine-Threonine KinasesReceptors, Transforming Growth Factor betaReceptor, Transforming Growth Factor-beta Type IIRNA, MessengerSmad3 ProteinSMAD3 protein, humanTransforming Growth Factor betaTransforming Growth Factor beta2

Identifiers

PMID21127203
PMCPMC3073847
OpenAlexW2150264698

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.