Evidence map›Paper›PMID 21126517›Full record

ArticleDevelopmental biology2011

Uhrf1 and Dnmt1 are required for development and maintenance of the zebrafish lens.

Rachel K Tittle, Ryan Sze, Anthony Ng, Richard J Nuckels, Mary E Swartz, Ryan M Anderson, Justin Bosch, Didier Y R Stainier, Johann K Eberhart, Jeffrey M Gross

Abstract read
In one paragraph

Article in Developmental biology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
3.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 82 citations in OpenAlex.

  1. Article
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  10. Epigenetic regulation of retinal development.Epigenetics & chromatin · 2021
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  11. Frontiers in immunology · 2021
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  15. Review
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  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Rachel K TittleSection of Molecular, Cell and Developmental Biology, Institute of Cell and Molecular Biology, The University of Texas at Austin, Austin, TX 78712, USA.
Ryan Sze
Anthony Ng
Richard J Nuckels
Mary E Swartz
Ryan M Anderson
Justin Bosch
Didier Y R Stainier
Johann K Eberhart
Jeffrey M Gross
The University of Texas at Austin · USUniversity of California, San Francisco · USSociety for Neuroscience · US

Funding

ZEBRAFISH INTERNATIONAL RESOURCE CENTERP40RR012546 · NCRR · UNIVERSITY OF OREGON · PI WESTERFIELD, MONTE · 1998 to 2011
$21.9M
MOLECULAR GENETICS OF LIVER DEVELOPMENTR01DK060322 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI STAINIER, DIDIER Y · 2001 to 2012
$3.8M
Genetic Regulation of Eye Development in ZebrafishR01EY018005 · NEI · UNIVERSITY OF TEXAS AT AUSTIN · PI GROSS, JEFFREY · 2008 to 2017
$3.3M
MOLECULAR GENETICS OF PANCREAS DEVELOPMENTR01DK075032 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI STAINIER, DIDIER Y · 2007 to 2011
$1.5M
Genetic Hierarchies and Cellular Behaviors during Zebrafish PalatogenesisR00DE018088 · NIDCR · UNIVERSITY OF TEXAS AT AUSTIN · PI EBERHART, JOHANN K · 2008 to 2010
$771k
The role of DNA methylation in lens fiber cell terminal differentiationF32EY020745 · NEI · UNIVERSITY OF TEXAS AT AUSTIN · PI TITTLE, RACHEL K. · 2010 to 2012
$153k
NCRR NIH HHS P40 RR012546NEI NIH HHS F32 EY020745NEI NIH HHS F32-EY020745NEI NIH HHS R01 EY018005NEI NIH HHS R01-EY18005NIDCR NIH HHS R00 DE018088NIDCR NIH HHS R00-DE018088NIDDK NIH HHS R01 DK060322NIDDK NIH HHS R01 DK075032NIDDK NIH HHS R01-DK075032NIDDK NIH HHS R01-DK60322
6 · The paper itself

Abstract

DNA methylation is one of the key mechanisms underlying the epigenetic regulation of gene expression. During DNA replication, the methylation pattern of the parent strand is maintained on the replicated strand through the action of Dnmt1 (DNA Methyltransferase 1). In mammals, Dnmt1 is recruited to hemimethylated replication foci by Uhrf1 (Ubiquitin-like, Containing PHD and RING Finger Domains 1). Here we show that Uhrf1 is required for DNA methylation in vivo during zebrafish embryogenesis. Due in part to the early embryonic lethality of Dnmt1 and Uhrf1 knockout mice, roles for these proteins during lens development have yet to be reported. We show that zebrafish mutants in uhrf1 and dnmt1 have defects in lens development and maintenance. uhrf1 and dnmt1 are expressed in the lens epithelium, and in the absence of Uhrf1 or of catalytically active Dnmt1, lens epithelial cells have altered gene expression and reduced proliferation in both mutant backgrounds. This is correlated with a wave of apoptosis in the epithelial layer, which is followed by apoptosis and unraveling of secondary lens fibers. Despite these disruptions in the lens fiber region, lens fibers express appropriate differentiation markers. The results of lens transplant experiments demonstrate that Uhrf1 and Dnmt1 functions are required lens-autonomously, but perhaps not cell-autonomously, during lens development in zebrafish. These data provide the first evidence that Uhrf1 and Dnmt1 function is required for vertebrate lens development and maintenance.

Indexed as

DNA MethylationAllelesAnimalsApoptosisCell DifferentiationDNA (Cytosine-5-)-Methyltransferase 1DNA (Cytosine-5-)-MethyltransferasesEpigenesis, GeneticEpitheliumGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantLens, CrystallineMutationRetinaTrans-ActivatorsZebrafishDNA (Cytosine-5-)-Methyltransferase 1DNA (Cytosine-5-)-MethyltransferasesDnmt1 protein, zebrafishTrans-ActivatorsUhrf1 protein, zebrafishZebrafish Proteins

Identifiers

PMID21126517
PMCPMC3022120
OpenAlexW2162276232

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.