Evidence map›Paper›PMID 21124925›Full record

ArticlePloS one2010

T. gondii RP promoters & knockdown reveal molecular pathways associated with proliferation and cell-cycle arrest.

Samuel L Hutson, Ernest Mui, Karen Kinsley, William H Witola, Michael S Behnke, Kamal El Bissati, Stephen P Muench, Brittany Rohrman, Susan R Liu, Robert Wollmann and 4 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.9field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. CD4Vaccines · 2023
    Article
  3. Review
  4. Review
  5. Key Limitations and New Insights Into theFrontiers in cellular and infection microbiology · 2020
    Review
  6. Potent Tetrahydroquinolone Eliminates Apicomplexan Parasites.Frontiers in cellular and infection microbiology · 2020
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 2 countries.

Samuel L HutsonDepartment of Surgery (Ophthalmology), The University of Chicago, Chicago, Illinois, USA.
Ernest Mui
Karen Kinsley
William H Witola
Michael S Behnke
Kamal El Bissati
Stephen P Muench
Brittany Rohrman
Susan R Liu
Robert Wollmann
Yuko Ogata
Ali Sarkeshik
John R Yates
Rima McLeod
University of Chicago · USScripps Research Institute · USCenter for Infectious Disease Research · USMontana State University · USUniversity of Leeds · GB

Funding

Optimizing Inhibitors of T. gondii ENRU01AI082180 · NIAID · UNIVERSITY OF CHICAGO · PI MCLEOD, RIMA L · 2009 to 2013
$4.4M
Towards a Vaccine to Prevent ToxoplasmosisU01AI077887 · NIAID · UNIVERSITY OF CHICAGO · PI MCLEOD, RIMA L · 2008 to 2012
$4.2M
Innate Immune Receptors for Toxoplasma gondiiR01AI071319 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI GAZZINELLI, RICARDO TOSTES · 2006 to 2010
$2.7M
NOVEL APICOMPLEXAN METABOLISM AND ORGANELLE TRANSITR01AI043228 · NIAID · UNIVERSITY OF CHICAGO · PI MCLEOD, RIMA L · 1997 to 2005
$2.1M
Howard Hughes Medical InstituteNCRR NIH HHS P41 RR0118232NIAID NIH HHS R01 AI043228NIAID NIH HHS R01AI043228NIAID NIH HHS R01 AI071319NIAID NIH HHS R01 AI071319-01NIAID NIH HHS U01 AI077887NIAID NIH HHS U01 AI082180NIAID NIH HHS U01 AI082180-01NIAID NIH HHS U01 AI77887
6 · The paper itself

Abstract

Molecular pathways regulating rapid proliferation and persistence are fundamental for pathogens but are not elucidated fully in Toxoplasma gondii. Promoters of T. gondii ribosomal proteins (RPs) were analyzed by EMSAs and ChIP. One RP promoter domain, known to bind an Apetela 2, bound to nuclear extract proteins. Promoter domains appeared to associate with histone acetyl transferases. To study effects of a RP gene's regulation in T. gondii, mutant parasites (Δrps13) were engineered with integration of tetracycline repressor (TetR) response elements in a critical location in the rps13 promoter and transfection of a yellow fluorescent-tetracycline repressor (YFP-TetR). This permitted conditional knockdown of rps13 expression in a tightly regulated manner. Δrps13 parasites were studied in the presence (+ATc) or absence of anhydrotetracycline (-ATc) in culture. -ATc, transcription of the rps13 gene and expression of RPS13 protein were markedly diminished, with concomitant cessation of parasite replication. Study of Δrps13 expressing Myc-tagged RPL22, -ATc, showed RPL22 diminished but at a slower rate. Quantitation of RNA showed diminution of 18S RNA. Depletion of RPS13 caused arrest of parasites in the G1 cell cycle phase, thereby stopping parasite proliferation. Transcriptional differences ±ATc implicate molecules likely to function in regulation of these processes. In vitro, -ATc, Δrps13 persists for months and the proliferation phenotype can be rescued with ATc. In vivo, however, Δrps13 could only be rescued when ATc was given simultaneously and not at any time after 1 week, even when L-NAME and ATc were administered. Immunization with Δrps13 parasites protects mice completely against subsequent challenge with wildtype clonal Type 1 parasites, and robustly protects mice against wildtype clonal Type 2 parasites. Our results demonstrate that G1 arrest by ribosomal protein depletion is associated with persistence of T. gondii in a model system in vitro and immunization with Δrps13 protects mice against subsequent challenge with wildtype parasites.

Indexed as

Cell CycleCell ProliferationAnimalsAntigens, ProtozoanBlotting, WesternBrainFemaleFluorescent Antibody TechniqueGene Expression ProfilingGene Expression RegulationGene Knockdown TechniquesHeat-Shock ProteinsImmunizationMiceModels, GeneticPromoter Regions, Genetic4-epianhydrotetracyclineAntigens, ProtozoanBAG1 protein, ToxoplasmaHeat-Shock ProteinsProtozoan ProteinsRibosomal ProteinsRNA, CatalyticSAG1 antigen, ToxoplasmaTetracyclinesTranscription Factors

Identifiers

PMID21124925
PMCPMC2989910
OpenAlexW2090252510

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.