Evidence map›Paper›PMID 21124866›Full record

ArticlePLoS computational biology2010

Treatment-mediated alterations in HIV fitness preserve CD4+ T cell counts but have minimal effects on viral load.

Naveen K Vaidya, Libin Rong, Vincent C Marconi, Daniel R Kuritzkes, Steven G Deeks, Alan S Perelson

Open access · goldAbstract read
In one paragraph

Article in PLoS computational biology, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Residual Viremia in Treated HIV+ Individuals.PLoS computational biology · 2016
    Article
  7. Article
  8. Post-treatment control of HIV infection.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 1 country.

Naveen K VaidyaTheoretical Biology and Biophysics Group, Los Alamos National Laboratory, Los Alamos, New Mexico, United States of America.
Libin Rong
Vincent C Marconi
Daniel R Kuritzkes
Steven G Deeks
Alan S Perelson
Los Alamos National Laboratory · USBrigham and Women's Hospital · USEmory University · USOakland University · USSan Francisco General Hospital · US

Funding

UCSF CLINICAL AND TRANSLATIONAL SCIENCE INSTITUTEUL1RR024131 · NCRR · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI JOHNSTON, S. CLAIBORNE · 2006 to 2011
$111.2M
Virology CoreP30AI027763 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI STEVEN Grant DEEKS · 1988 to 2026
$93.6M
Modeling Viral and T Lymphocyte DynamicsR01OD011095 · OD · TRIAD NATIONAL SECURITY, LLC · PI PERELSON, ALAN S · 2012 to 2024
$5.0M
MODELING VIRAL AND T LYMPHOCYTE DYNAMICSR01RR006555 · NCRR · UNIVERSITY OF CALIF-LOS ALAMOS NAT LAB · PI PERELSON, ALAN S · 1991 to 2011
$3.9M
Immune System Modeling/HIVR01AI028433 · NIAID · UNIVERSITY OF CALIF-LOS ALAMOS NAT LAB · PI PERELSON, ALAN S · 1990 to 2021
$3.7M
Immune System Modeling/HIVR37AI028433 · NIAID · UNIVERSITY OF CALIF-LOS ALAMOS NAT LAB · PI PERELSON, ALAN S · 2002 to 2011
$2.4M
Immunologic Control of Drug-resistant HIV-1R01AI052745 · NIAID · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI DEEKS, STEVEN GRANT · 2002 to 2005
$2.0M
Preventing the Establishment of Enfuvirtide-resistance in the Latent ReservoirK24AI069994 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI DEEKS, STEVEN GRANT · 2007 to 2016
$1.5M
Core Center for Quantitative BiologyP30EB011339 · NIBIB · OAKLAND UNIVERSITY · PI ROTH, BRADLEY JOHN · 2009 to 2010
$722k
Treatment Intensification for Drug-Resistant HIVR21AI055273 · NIAID · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI DEEKS, STEVEN GRANT · 2003 to 2004
$454k
NCRR NIH HHS R01 RR006555NCRR NIH HHS RR06555NCRR NIH HHS UL1 RR024131NIAID NIH HHS AI052745NIAID NIH HHS AI055273NIAID NIH HHS AI28433NIAID NIH HHS K24 AI069994NIAID NIH HHS K24AI069994NIAID NIH HHS P0 AI27763NIAID NIH HHS P30 AI027763NIAID NIH HHS R01 AI028433NIAID NIH HHS R01 AI052745NIAID NIH HHS R21 AI055273NIAID NIH HHS R37 AI028433NIBIB NIH HHS P30 EB011339NIBIB NIH HHS P30-EB011339NIH HHS R01 OD011095
6 · The paper itself

Abstract

For most HIV-infected patients, antiretroviral therapy controls viral replication. However, in some patients drug resistance can cause therapy to fail. Nonetheless, continued therapy with a failing regimen can preserve or even lead to increases in CD4+ T cell counts. To understand the biological basis of these observations, we used mathematical models to explain observations made in patients with drug-resistant HIV treated with enfuvirtide (ENF/T-20), an HIV-1 fusion inhibitor. Due to resistance emergence, ENF was removed from the drug regimen, drug-sensitive virus regrown, and ENF was re-administered. We used our model to study the dynamics of plasma-viral RNA and CD4+ T cell levels, and the competition between drug-sensitive and resistant viruses during therapy interruption and re-administration. Focusing on resistant viruses carrying the V38A mutation in gp41, we found ENF-resistant virus to be 17±3% less fit than ENF-sensitive virus in the absence of the drug, and that the loss of resistant virus during therapy interruption was primarily due to this fitness cost. Using viral dynamic parameters estimated from these patients, we show that although re-administration of ENF cannot suppress viral load, it can, in the presence of resistant virus, increase CD4+ T cell counts, which should yield clinical benefits. This study provides a framework to investigate HIV and T cell dynamics in patients who develop drug resistance to other antiretroviral agents and may help to develop more effective strategies for treatment.

Indexed as

CD4 Lymphocyte CountCD4-Positive T-LymphocytesDrug Resistance, ViralEnfuvirtideHIV-1HIV Envelope Protein gp41HIV Fusion InhibitorsHIV InfectionsHost-Pathogen InteractionsHumansModels, BiologicalPeptide FragmentsPrognosisTreatment OutcomeViral LoadEnfuvirtideHIV Envelope Protein gp41HIV Fusion InhibitorsPeptide Fragments

Identifiers

PMID21124866
PMCPMC2991251
OpenAlexW2127759858

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.