Evidence map›Paper›PMID 21120996›Full record

ArticleArthritis and rheumatism2010

Most common single-nucleotide polymorphisms associated with rheumatoid arthritis in persons of European ancestry confer risk of rheumatoid arthritis in African Americans.

Laura B Hughes, Richard J Reynolds, Elizabeth E Brown, James M Kelley, Brian Thomson, Doyt L Conn, Beth L Jonas, Andrew O Westfall, Miguel A Padilla, Leigh F Callahan and 7 more

Open access · greenAbstract read
In one paragraph

Article in Arthritis and rheumatism, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed, 4 pooled it
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 4 syntheses or guidelines pooled it, 64 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Associations between TNFAIP3 gene polymorphisms and rheumatoid arthritis: a meta-analysis.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2012
    Pooled it
  4. Pooled it
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  17. T Cell Migration in Rheumatoid Arthritis.Frontiers in immunology · 2015
    Review
  18. Association between CCR6 and rheumatoid arthritis: a meta-analysis.International journal of clinical and experimental medicine · 2015
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 1 institution in 1 country.

Laura B HughesUniversity of Alabama at Birmingham, 1530 3rd Avenue South, SHEL 210, Birmingham, AL 35294-2182, USA.
Richard J Reynolds
Elizabeth E Brown
James M Kelley
Brian Thomson
Doyt L Conn
Beth L Jonas
Andrew O Westfall
Miguel A Padilla
Leigh F Callahan
Edwin A Smith
Richard D Brasington
Jeffrey C Edberg
Robert P Kimberly
Larry W Moreland
Robert M Plenge
S Louis Bridges
University of Alabama at Birmingham · US

Funding

UNC CLINICAL AND TRANSLATIONAL SCIENCE AWARD: BPCAUL1RR025747 · NCRR · UNIV OF NORTH CAROLINA CHAPEL HILL · PI RUNGE, MARSCHALL S. · 2008 to 2011
$44.6M
Zonisamide in Patients with Neuropathic Pain Associated with Diabetic NeuropathyM01RR000046 · NCRR · UNIV OF NORTH CAROLINA CHAPEL HILL · PI JOY, MELANIE S · 1985 to 2008
$38.5M
Atlanta Clinical and Translational Science Institute (ACTSI) RenewalUL1TR000454 · NCATS · EMORY UNIVERSITY · PI STEPHENS, DAVID S · 2012 to 2016
$25.8M
Zevalin Radioimmunotherapy Using a Modified TreatmentM01RR000032 · NCRR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI RICH, ROBERT R. · 1985 to 2008
$23.6M
UAB CENTER FOR CLINICAL AND TRANSLATIONAL SCIENCE (CCTS) UL1: BPCAUL1RR025777 · NCRR · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI GUAY-WOODFORD, LISA MARIE · 2008 to 2011
$22.3M
Sex Related Determinants Of Pain In FibromyalgiaP60AR048095 · NIAMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI ARNETT, DONNA K · 2002 to 2012
$11.7M
Genome-Wide Association Study in African-Americans with Rheumatoid ArthritisR01AR057202 · NIAMS · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI BRIDGES, S LOUIS · 2009 to 2013
$4.2M
UAB Statistical Genetics Post-Doctoral Training ProgramT32HL072757 · NHLBI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI TIWARI, HEMANT K. · 2003 to 2016
$3.8M
Dissection of two rheumatoid arthritis risk loci from genome-wide studiesR01AR056768 · NIAMS · BRIGHAM AND WOMEN'S HOSPITAL · PI BRENNER, MICHAEL B. · 2009 to 2013
$1.9M
Meta-analysis of GWAS data to identify novel rheumatoid arthritis risk lociR01AR057108 · NIAMS · BRIGHAM AND WOMEN'S HOSPITAL · PI PLENGE, ROBERT M · 2009 to 2010
$557k
NCATS NIH HHS UL1 TR000454NCRR NIH HHS 5UL1-RR-025777-03NCRR NIH HHS M01 RR000032NCRR NIH HHS M01 RR000046NCRR NIH HHS M01-RR-00046NCRR NIH HHS UL1 RR025747NCRR NIH HHS UL1-RR-025747NHLBI NIH HHS T32 HL072757NHLBI NIH HHS T32-HL-072757NIAMS NIH HHS N01-AR-62278NIAMS NIH HHS P60 AR048095NIAMS NIH HHS P60-AR-048095NIAMS NIH HHS R01 AR056768NIAMS NIH HHS R01-AR-056768NIAMS NIH HHS R01 AR057108NIAMS NIH HHS R01-AR-057108NIAMS NIH HHS R01 AR057202NIAMS NIH HHS R01-AR-057202
6 · The paper itself

Abstract

objectiveLarge-scale genetic association studies have identified >20 rheumatoid arthritis (RA) risk alleles among individuals of European ancestry. The influence of these risk alleles has not been comprehensively studied in African Americans. We therefore sought to examine whether these validated RA risk alleles are associated with RA risk in an African American population.

methodsTwenty-seven candidate single-nucleotide polymorphisms (SNPs) were genotyped in 556 autoantibody-positive African Americans with RA and 791 healthy African American control subjects. Odds ratios (ORs) and 95% confidence intervals (95% CIs) for each SNP were compared with previously published ORs for RA patients of European ancestry. We then calculated a composite genetic risk score (GRS) for each individual based on the sum of all risk alleles.

resultsOverlap of the ORs and 95% CIs between the European and African American populations was observed for 24 of the 27 candidate SNPs. Conversely, 3 of the 27 SNPs (CCR6 rs3093023, TAGAP rs394581, and TNFAIP3 rs6920220) demonstrated ORs in the opposite direction from those reported for RA patients of European ancestry. The GRS analysis indicated a small but highly significant probability that African American patients relative to control subjects were enriched for the risk alleles validated in European RA patients (P = 0.00005).

conclusionThe majority of RA risk alleles previously validated for RA patients of European ancestry showed similar ORs in our population of African Americans with RA. Furthermore, the aggregate GRS supports the hypothesis that these SNPs are risk alleles for RA in the African American population. Future large-scale genetic studies are needed to validate these risk alleles and identify novel RA risk alleles in African Americans.

Indexed as

AdultAllelesArthritis, RheumatoidBlack or African AmericanCase-Control StudiesDNA-Binding ProteinsFemaleGenotypeHumansIntracellular Signaling Peptides and ProteinsMaleMiddle AgedNuclear ProteinsOdds RatioPolymorphism, Single NucleotideReceptors, CCR6CCR6 protein, humanDNA-Binding ProteinsIntracellular Signaling Peptides and ProteinsNuclear ProteinsReceptors, CCR6TNFAIP3 protein, humanTumor Necrosis Factor alpha-Induced Protein 3

Identifiers

PMID21120996
PMCPMC3030622
OpenAlexW2157134038

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.