Evidence map›Paper›PMID 21119002›Full record

ArticleMolecular biology of the cell2011

Interactions of CstF-64, CstF-77, and symplekin: implications on localisation and function.

Marc-David Ruepp, Christoph Schweingruber, Nicole Kleinschmidt, Daniel Schümperli

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed.

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  10. U7 snRNA: A tool for gene therapy.The journal of gene medicine · 2021
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Marc-David RueppInstitute of Cell Biology, University of Bern, CH-3012 Bern, Switzerland.
Christoph Schweingruber
Nicole Kleinschmidt
Daniel Schümperli

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cleavage/polyadenylation of mRNAs and 3' processing of replication-dependent histone transcripts are both mediated by large complexes that share several protein components. Functional studies of these shared proteins are complicated by the cooperative binding of the individual subunits. For CstF-64, an additional difficulty is that symplekin and CstF-77 bind mutually exclusively to its hinge domain. Here we have identified CstF-64 and symplekin mutants that allowed us to distinguish between these interactions and to elucidate the role of CstF-64 in the two processing reactions. The interaction of CstF-64 with symplekin is limiting for histone RNA 3' processing but relatively unimportant for cleavage/polyadenylation. In contrast, the nuclear accumulation of CstF-64 depends on its binding to CstF-77 and not to symplekin. Moreover, the CstF-64 paralogue CstF-64Tau can compensate for the loss of CstF-64. As CstF-64Tau has a lower affinity for CstF-77 than CstF-64 and is relatively unstable, it is the minor form. However, it may become up-regulated when the CstF-64 level decreases, which has biological implications for spermatogenesis and probably also for other regulatory events. Thus, the interactions between CstF-64/CstF-64Tau and CstF-77 are important for the maintenance of stoichiometric nuclear levels of the CstF complex components and for their intracellular localization, stability, and function.

Indexed as

Blotting, Far-WesternCleavage Stimulation FactorFluorescent Antibody TechniqueGene ExpressionHeLa CellsHistonesHumansmRNA Cleavage and Polyadenylation FactorsNuclear ProteinsPolyadenylationProtein BindingProtein Processing, Post-TranslationalReverse Transcriptase Polymerase Chain ReactionRNA 3' End ProcessingRNA 3' Polyadenylation SignalsRNA, MessengerCleavage Stimulation FactorHistonesmRNA Cleavage and Polyadenylation FactorsNuclear ProteinsRNA, MessengerRNA PrecursorsSYMPK protein, human

Identifiers

PMID21119002
PMCPMC3016980

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.