Evidence map›Paper›PMID 21117240›Full record

ArticleProteins2011

Insights into Mycoplasma genitalium metabolism revealed by the structure of MG289, an extracytoplasmic thiamine binding lipoprotein.

Katherine H Sippel, Balasubramanian Venkatakrishnan, Susan K Boehlein, Banumathi Sankaran, Jeanne G Quirit, Lakshamanan Govindasamy, Mavis Agbandje-McKenna, Steve Goodison, Charles J Rosser, Robert McKenna

Abstract read
In one paragraph

Article in Proteins, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
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  3. Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Katherine H SippelDepartment of Biochemistry and Molecular Biology, College of Medicine, Gainesville, Florida 32610, USA.
Balasubramanian Venkatakrishnan
Susan K Boehlein
Banumathi Sankaran
Jeanne G Quirit
Lakshamanan Govindasamy
Mavis Agbandje-McKenna
Steve Goodison
Charles J Rosser
Robert McKenna
Florida College · USCancer Research Institute · USLawrence Berkeley National Laboratory · USUniversity of Florida · USUniversity of Florida Health Science Center · US

Funding

ZINC FINGER-DNA COMPLEXP41RR001646 · NCRR · CORNELL UNIVERSITY ITHACA · PI CINGOLANI, GINO · 1985 to 2011
$23.8M
CATALYTIC MECHANISM OF CARBONIC ANHYDRASER01GM025154 · NIGMS · UNIVERSITY OF FLORIDA · PI SILVERMAN, DAVID N · 1985 to 2012
$4.5M
Howard Hughes Medical InstituteNCI NIH HHS Y1-CO-1020NCRR NIH HHS P41 RR001646NCRR NIH HHS RR001646NIGMS NIH HHS R01 GM025154NIGMS NIH HHS Y1-GM-1104
6 · The paper itself

Abstract

Mycoplasma genitalium is one of the smallest organisms capable of self-replication and its sequence is considered a starting point for understanding the minimal genome required for life. MG289, a putative phosphonate substrate binding protein, is considered to be one of these essential genes. The crystal structure of MG289 has been solved at 1.95 Å resolution. The structurally identified thiamine binding region reveals possible mechanisms for ligand promiscuity. MG289 was determined to be an extracytoplasmic thiamine binding lipoprotein. Computational analysis, size exclusion chromatography, and small angle X-ray scattering indicates that MG289 homodimerizes in a concentration-dependant manner. Comparisons to the thiamine pyrophosphate binding homolog Cypl reveal insights into the metabolic differences between mycoplasmal species including identifying possible kinases for cofactor phosphorylation and describing the mechanism of thiamine transport into the cell. These results provide a baseline to build our understanding of the minimal metabolic requirements of a living organism.

Indexed as

Crystallography, X-RayLipoproteinsModels, MolecularMycoplasma genitaliumPeriplasmic Binding ProteinsProtein BindingProtein MultimerizationProtein Structure, TertiaryRecombinant ProteinsScattering, Small AngleThiamineX-Ray DiffractionLipoproteinsPeriplasmic Binding ProteinsRecombinant ProteinsThiamine

Identifiers

PMID21117240
PMCPMC3017431
OpenAlexW2115607712

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.