Evidence map›Paper›PMID 21116979›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2011

Quantum dots for quantitative flow cytometry.

Tione Buranda, Yang Wu, Larry A Sklar

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Methods for Conjugating Antibodies with Quantum Dots.Molecules (Basel, Switzerland) · 2025
    Review
  2. Review
  3. Article
  4. Review
  5. Article
  6. Cell Cytometry: Review and Perspective on Biotechnological Advances.Frontiers in bioengineering and biotechnology · 2019
    Review
  7. Article
  8. Article
  9. Article
  10. Low-affinity binding inMolecular biology of the cell · 2017
    Article
  11. Optical Properties of CdSe/ZnS Nanocrystals.Journal of research of the National Institute of Standards and Technology · 2014
    Article
  12. Quantification of cell surface proteins with bispecific antibodies.Protein engineering, design & selection : PEDS · 2013
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Tione BurandaDepartment of Pathology and Cancer Center, University of New Mexico School of Medicine, Albuquerque, NM, USA. buranda@unm.edu
Yang Wu
Larry A Sklar

Funding

Yeast Biology ConsortiumU54MH084690 · NIMH · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI TEGOS, GEORGE P · 2008 to 2013
$14.4M
New Mexico Molecular Libraries Screening Center(RMI)U54MH074425 · NIMH · UNIVERSITY OF NEW MEXICO · PI SKLAR, LARRY A. · 2005 to 2008
$10.0M
Force, Conformation & Affinity in VLA-4 and LFA-1 AdhesionR01HL081062 · NHLBI · UNIVERSITY OF NEW MEXICO · PI SKLAR, LARRY A. · 2007 to 2011
$2.4M
Membrane Organization in Cell Signaling and AdhesionK25AI060036 · NIAID · UNIVERSITY OF NEW MEXICO · PI BURANDA, TIONE · 2004 to 2008
$704k
NHLBI NIH HHS HL081062NHLBI NIH HHS R01 HL081062NIAID NIH HHS K25 AI060036NIAID NIH HHS K25AI60036NIMH NIH HHS U54 MH074425NIMH NIH HHS U54MH074425NIMH NIH HHS U54 MH084690NIMH NIH HHS U54MH084690
6 · The paper itself

Abstract

In flow cytometry, the quantitation of fluorophore-tagged ligands and receptors on cells or at particulate surfaces is achieved by the use of standard beads of known calibration. To the best of our knowledge, only those calibration beads based on fluorescein, EGFP, phycoerythyrin and allophycocyanine are readily available from commercial sources. Because fluorophore-based standards are specific to the selected fluorophore tag, their applicability is limited to the spectral region of resonance. Since quantum dots can be photo-excited over a continuous and broad spectral range governed by their size, it is possible to match the spectral range and width (absorbance and emission) of a wide range of fluorophores with appropriate quantum dots. Accordingly, quantitation of site coverage of the target fluorophores can be readily achieved using quantum dots whose emission spectra overlaps with the target fluorophore.This chapter focuses on the relevant spectroscopic concepts and molecular assembly of quantum dot fluorescence calibration beads. We first examine the measurement and applicability of spectroscopic parameters, ε, φ, and %T to fluorescence calibration standards, where ε is the absorption coefficient of the fluorophore, φ is the quantum yield of the fluorophore, and %T is the percent fraction of emitted light that is transmitted by the bandpass filter at the detector PMT. The modular construction of beads decorated with discrete quantities of quantum dots with defined spectroscopic parameters is presented in the context of a generalizable approach to calibrated measurements of fluorescence in flow cytometry.

Indexed as

Quantum DotsCalibrationFlow CytometryFluoresceinFluorescenceFluorescent DyesHumansMicroscopy, Electron, TransmissionMicrospheresReproducibility of ResultsSpectrometry, FluorescenceStaining and LabelingFluoresceinFluorescent Dyes

Identifiers

PMID21116979
PMCPMC4388555

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.