Evidence map›Paper›PMID 21116842›Full record

ArticleVirus genes2011

The genomic constellation of a novel avian orthoreovirus strain associated with runting-stunting syndrome in broilers.

Krisztián Bányai, Eszter Dandár, Kristi Moore Dorsey, Tamás Mató, Vilmos Palya

Abstract read
PubMed Publisher
In one paragraph

Article in Virus genes, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 60 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Orthoreovirus avis in asymptomatic broiler chickens.Tropical animal health and production · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Detection of Avian Reoviruses in Wild Birds in Poland.Journal of veterinary research · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Krisztián BányaiVeterinary Medical Research Institute, Hungarian Academy of Sciences, Budapest, Hungary. bkrota@hotmail.com
Eszter Dandár
Kristi Moore Dorsey
Tamás Mató
Vilmos Palya
Ceva Animal Health (United Kingdom) · GBHungarian Academy of Sciences · HUHUN-REN Veterinary Medical Research Institute · HU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Avian orthoreoviruses (ARVs) are responsible for considerable economic losses in broiler chickens; yet, the genetic characterization of most ARV strains is limited to a few genes, and the full coding region has been determined for only S1133 and 138, two ARV strains associated with tenosynovitis. Recently, in parts of the United States, ARVs with novel neutralization antigen type were isolated from chickens afflicted with runting-stunting syndrome. One such strain, AVS-B, was selected for full genome sequencing and phylogenetic analysis. The complete genome was 23,494 bp in size and included 12 open reading frames. The lengths of the coding regions, as well as those of the 5' and 3' ends, were fairly well conserved between AVS-B and other reference strains. In pairwise comparisons to the S1133 and 138 strains, the AVS-B strain shared a wide range of sequence identities along each genome segment, i.e., a range of 54-55% for the σC coding region of S1 genome segment and 91-93% for the S2 genome segment. Phylogenetic analyses of individual genes of AVS-B did not identify any single common ancestor among more completely characterized ARV strains for which sequence data are available. One exception to this lack of identity was strain 138, which shared 90-93% nt identity with AVS-B along seven of ten genome segments; only M2, M3, and S1 segments of these strains shared lower sequence identities. Collectively, our analyses indicated that multiple reassortment events and strong divergence caused by the accumulation of point mutations could have led to the observed assortment and genetic heterogeneity of the AVS-B genome.

Indexed as

Genome, ViralPhylogenyAnimalsCapsid ProteinsChickensGenetic HeterogeneityOpen Reading FramesOrthoreovirus, AvianPoultry DiseasesReoviridae InfectionsRNA-Binding ProteinsRNA-Dependent RNA PolymeraseRNA, ViralViral ProteinsViral Regulatory and Accessory ProteinsCapsid Proteinslambda3 protein, Reovirusmu2 protein, ReovirusRNA-Binding ProteinsRNA-Dependent RNA PolymeraseRNA, Viralsigma 1 protein, reovirussigma NS protein, Reovirussigma protein 3, ReovirusViral ProteinsViral Regulatory and Accessory Proteins

Identifiers

PMID21116842
OpenAlexW2077490146

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.