Evidence map›Paper›PMID 21115819›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2010

Jumonji domain protein JMJD5 functions in both the plant and human circadian systems.

Matthew A Jones, Michael F Covington, Luciano DiTacchio, Christopher Vollmers, Satchidananda Panda, Stacey L Harmer

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 99 papers.

0numbers the graph read from it
0cells of the map it votes in
99citing papers in PubMed
4.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

99 citing papers in PubMed, 162 citations in OpenAlex.

  1. Article
  2. JMJD5: a multifunctional regulator in development, homeostasis, and cancer.Frontiers in cell and developmental biology · 2026
    Review
  3. Article
  4. Article
  5. Nature's Master of Ceremony: TheNpj biological timing and sleep · 2025
    Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Exploring links between 2-oxoglutarate-dependent oxygenases and Alzheimer's disease.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2022
    Review
  17. Article
  18. Article
  19. Article
  20. Review

39 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Matthew A JonesDepartment of Plant Biology, College of Biological Sciences, University of California, Davis, CA 95616, USA.
Michael F Covington
Luciano DiTacchio
Christopher Vollmers
Satchidananda Panda
Stacey L Harmer
Salk Institute for Biological Studies · USUniversity of California, Davis · USUniversity of Minnesota · US

Funding

Molecular analysis of circadian regulation in ArabidopsisR01GM069418 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI HARMER, STACEY L. · 2004 to 2016
$3.3M
NIGMS NIH HHS GM069418NIGMS NIH HHS R01 GM069418
6 · The paper itself

Abstract

Circadian clocks are near-ubiquitous molecular oscillators that coordinate biochemical, physiological, and behavioral processes with environmental cues, such as dawn and dusk. Circadian timing mechanisms are thought to have arisen multiple times throughout the evolution of eukaryotes but share a similar overall structure consisting of interlocking transcriptional and posttranslational feedback loops. Recent work in both plants and animals has also linked modification of histones to circadian clock function. Now, using data from published microarray experiments, we have identified a histone demethylase, jumonji domain containing 5 (JMJD5), as a previously undescribed participant in both the human and Arabidopsis circadian systems. Arabidopsis JMJD5 is coregulated with evening-phased clock components and positively affects expression of clock genes expressed at dawn. We found that both Arabidopsis jmjd5 mutant seedlings and mammalian cell cultures deficient for the human ortholog of this gene have similar fast-running circadian oscillations compared with WT. Remarkably, both the Arabidopsis and human JMJD5 orthologs retain sufficient commonality to rescue the circadian phenotype of the reciprocal system. Thus, JMJD5 plays an interchangeable role in the timing mechanisms of plants and animals despite their highly divergent evolutionary paths.

Indexed as

ArabidopsisArabidopsis ProteinsBiological ClocksCell LineCircadian RhythmGene Expression Regulation, PlantHumansJumonji Domain-Containing Histone DemethylasesPhenotypePhotoperiodProtein IsoformsSeedlingsTranscription FactorsArabidopsis ProteinsJumonji Domain-Containing Histone DemethylasesProtein IsoformsTOC1 protein, ArabidopsisTranscription Factors

Identifiers

PMID21115819
PMCPMC3003042
OpenAlexW2080326437

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.