Evidence map›Paper›PMID 21115732›Full record

ArticleJournal of immunology (Baltimore, Md. : 1950)2011

Remarkable conservation of distinct nonclassical MHC class I lineages in divergent amphibian species.

Ana Goyos, Jessica Sowa, Yuko Ohta, Jacques Robert

Open access · greenAbstract readComparative Study
In one paragraph

Article in Journal of immunology (Baltimore, Md. : 1950), 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 52 citations in OpenAlex.

  1. Current issues in molecular biology · 2026
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  9. TheAnimals : an open access journal from MDPI · 2019
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  15. Distinct MHC class I-like interacting invariant T cell lineage at the forefront of mycobacterial immunity uncovered inProceedings of the National Academy of Sciences of the United States of America · 2018
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Ana GoyosDepartment of Microbiology and Immunology, University of Rochester Medical Center, Rochester, NY 14642, USA.
Jessica Sowa
Yuko Ohta
Jacques Robert
University of Rochester Medical Center · USUniversity of Maryland, Baltimore · US

Funding

A Xenopus Laevis Research Resource for ImmunologyR24AI059830 · NIAID · UNIVERSITY OF ROCHESTER · PI JACQUES Robert · 2004 to 2026
$7.7M
ONTOGENY AND PHYLOGENY OF THE MHCR01AI027877 · NIAID · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI FLAJNIK, MARTIN F · 1995 to 2009
$3.2M
Nonclassical MHC and Early Thymocyte DevelopmentF31AI068610 · NIAID · UNIVERSITY OF ROCHESTER · PI GOYOS, ANA S · 2006 to 2009
$156k
Involvement of Nonclassical MHC in Early T Cell Ontogeny in XenopusR03HD061671 · NICHD · UNIVERSITY OF ROCHESTER · PI ROBERT, JACQUES · 2009 to 2010
$154k
ONTOGENY AND PHYLOGENY OF THE MHCR29AI027877 · NIAID · UNIVERSITY OF MIAMI SCHOOL OF MEDICINE · PI FLAJNIK, MARTIN F. · 1989 to 1993
–
NIAID NIH HHS AI27877NIAID NIH HHS F31 AI068610NIAID NIH HHS F31-AI068610NIAID NIH HHS R01 AI027877NIAID NIH HHS R24 AI059830NIAID NIH HHS R24-AI-059830NICHD NIH HHS R03-HD-06167-01NICHD NIH HHS R03 HD061671
6 · The paper itself

Abstract

Nonclassical MHC class Ib (class Ib) genes are heterogeneous genes encoding molecules that are structurally similar to classical MHC class Ia molecules but with limited tissue distribution and polymorphism. Mammalian class Ib genes have diverse and often uncharacterized functions, and because of their rapid rate of evolution, class Ib phylogeny is difficult to establish. We have conducted an extensive genomic, molecular, and phylogenetic characterization of class Ib genes in two Xenopodinae amphibian species of different genera that diverged from a common ancestor as long ago as primates and rodents (∼65 million years). In contrast with the unsteadiness of mammalian class Ib genes, our results reveal an unusual degree of conservation of most Xenopodinae class Ib gene lineages, including a novel monogenic lineage represented by the divergent Xenopus laevis XNC10 gene and its unequivocal Silurana (Xenopus) tropicalis orthologue, SNC10. The preferential expression of this gene lineage by thymocytes themselves from the onset of thymic organogenesis is consistent with a specialized role of class Ib in early T cell development and suggests such a function is conserved in all tetrapods.

Indexed as

Ambystoma mexicanumAmphibiansAnimalsCell LineageConserved SequenceEvolution, MolecularHistocompatibility Antigens Class IMammalsMultigene FamilyRana pipiensXenopus laevisHistocompatibility Antigens Class I

Identifiers

PMID21115732
PMCPMC3141293
OpenAlexW1956322415

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.