Evidence map›Paper›PMID 21115539›Full record

ArticleProtein engineering, design & selection : PEDS2011

The identification of novel cyclic AMP-dependent protein kinase anchoring proteins using bioinformatic filters and peptide arrays.

William A McLaughlin, Tingjun Hou, Susan S Taylor, Wei Wang

Open access · bronzeAbstract read
In one paragraph

Article in Protein engineering, design & selection : PEDS, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. An entirely specific type I A-kinase anchoring protein that can sequester two molecules of protein kinase A at mitochondria.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 4 institutions in 2 countries.

William A McLaughlinDepartment of Basic Science, The Commonwealth Medical College, 501 Madison Avenue, Scranton, PA 18510, USA. wmclaughlin@tcmedc.org
Tingjun Hou
Susan S Taylor
Wei Wang
Center for Theoretical Biological Physics · USCommonwealth Medical College · USHoward Hughes Medical Institute · USSoochow University · CN

Funding

Project# 4: INTERACTIONS OF ANCHORING PROTEINS WITH THEIR TARGETSP01DK054441 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI TAYLOR, SUSAN S. · 1999 to 2017
$27.3M
HEMOGLOBIN AND BLOOD PROTEIN CHEMISTRYT32DK007233 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KOMIVES, ELIZABETH A. · 1986 to 2012
$4.6M
NIDDK NIH HHS P01 DK054441NIDDK NIH HHS P01 DK54441NIDDK NIH HHS T32DK07233
6 · The paper itself

Abstract

A-kinase anchoring proteins (AKAPs) localize cyclic AMP-dependent protein kinase (PKA) to specific regions in the cell and place PKA in proximity to its phosphorylation targets. A computational model was created to identify AKAPs that bind to the docking/dimerization domain of the RII alpha isoform of the regulatory subunit of PKA. The model was used to search the entire human proteome, and the top candidates were tested for an interaction using peptide array experiments. Verified interactions include sphingosine kinase interacting protein and retinoic acid-induced protein 16. These interactions highlight new signaling pathways mediated by PKA.

Indexed as

A Kinase Anchor ProteinsAmino Acid SequenceAnimalsComputational BiologyCyclic AMP-Dependent Protein KinasesHumansMiceMolecular Sequence DataProtein Array AnalysisReproducibility of ResultsSignal TransductionA Kinase Anchor ProteinsCyclic AMP-Dependent Protein Kinases

Identifiers

PMID21115539
PMCPMC3038459
OpenAlexW2153764085

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.