Evidence map›Paper›PMID 21112275›Full record

ArticleBiophysical journal2010

A 3-D model of ligand transport in a deforming extracellular space.

Nikola Kojić, Austin Huang, Euiheon Chung, Miloš Ivanović, Nenad Filipović, Miloš Kojić, Daniel J Tschumperlin

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. miR-146a regulates mechanotransduction and pressure-induced inflammation in small airway epithelium.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2012
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Nikola KojićHarvard-MIT Division of Health Sciences and Technology, Cambridge, Massachusetts, USA.
Austin Huang
Euiheon Chung
Miloš Ivanović
Nenad Filipović
Miloš Kojić
Daniel J Tschumperlin
Harvard–MIT Division of Health Sciences and Technology · USHarvard University · USUniversity of Kragujevac · RSMassachusetts General Hospital · US

Funding

Mechanical Stress as a Stimulus for Airway RemodelingR01HL088028 · NHLBI · HARVARD SCHOOL OF PUBLIC HEALTH · PI DRAZEN, JEFFREY MARK · 2007 to 2011
$2.0M
Transduction of the environment in airway epitheliumR01HL082856 · NHLBI · HARVARD SCHOOL OF PUBLIC HEALTH · PI TSCHUMPERLIN, DANIEL J. · 2006 to 2009
$1.4M
NHLBI NIH HHS HL082856NHLBI NIH HHS R01 HL082856NHLBI NIH HHS R01 HL088028NHLBI NIH HHS R01 HL88028
6 · The paper itself

Abstract

Cells communicate through shed or secreted ligands that traffic through the interstitium. Force-induced changes in interstitial geometry can initiate mechanotransduction responses through changes in local ligand concentrations. To gain insight into the temporal and spatial evolution of such mechanotransduction responses, we developed a 3-D computational model that couples geometric changes observed in the lateral intercellular space (LIS) of mechanically loaded airway epithelial cells to the diffusion-convection equations that govern ligand transport. By solving the 3-D fluid field under changing boundary geometries, and then coupling the fluid velocities to the ligand transport equations, we calculated the temporal changes in the 3-D ligand concentration field. Our results illustrate the steady-state heterogeneities in ligand distribution that arise from local variations in interstitial geometry, and demonstrate that highly localized changes in ligand concentration can be induced by mechanical loading, depending on both local deformations and ligand convection effects. The occurrence of inhomogeneities at steady state and in response to mechanical loading suggest that local variations in ligand concentration may have important effects on cell-to-cell variations in basal signaling state and localized mechanotransduction responses.

Indexed as

Models, BiologicalBiological TransportExtracellular SpaceHeparin-binding EGF-like Growth FactorHumansIntercellular Signaling Peptides and ProteinsLigandsRheologyHBEGF protein, humanHeparin-binding EGF-like Growth FactorIntercellular Signaling Peptides and ProteinsLigands

Identifiers

PMID21112275
PMCPMC2998622
OpenAlexW2041792084

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.