Evidence map›Paper›PMID 21111702›Full record

ArticleAnalytical biochemistry2011

Detection of respiratory syncytial virus using nanoparticle amplified immuno-polymerase chain reaction.

Jonas W Perez, Elizabeth A Vargis, Patricia K Russ, Frederick R Haselton, David W Wright

Open access · greenAbstract read
In one paragraph

Article in Analytical biochemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 69 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. UrinaryEXCLI journal · 2020
    Article
  5. Review
  6. Detection ofInternational journal of nanomedicine · 2018
    Article
  7. Review
  8. Article
  9. Review
  10. Article
  11. Review
  12. Immuno-PCR for the early serological diagnosis of acute infectious diseases: the Q fever paradigm.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2012
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Jonas W PerezDepartment of Chemistry, Vanderbilt University, Nashville, TN 37235, USA.
Elizabeth A Vargis
Patricia K Russ
Frederick R Haselton
David W Wright
Vanderbilt University · US

Funding

Chemistry-Biology Interface Training GrantT32GM065086 · NIGMS · VANDERBILT UNIVERSITY · PI BACHMANN, BRIAN O, SULIKOWSKI, GARY ALLEN · 2002 to 2022
$7.0M
TRAINING GRANT IN MECHANISMS OF VASCULAR DISEASET32HL007751 · NHLBI · VANDERBILT UNIVERSITY · PI BOCK, PAUL E · 1994 to 2014
$6.6M
Viral Detection Using Fluorescent NanocrystalsR01EB004537 · NIBIB · VANDERBILT UNIVERSITY · PI WRIGHT, DAVID W · 2006 to 2008
$997k
Development of DNA Logic Operations for Viral DiagnosticsR21EB009235 · NIBIB · VANDERBILT UNIVERSITY · PI HASELTON, FREDERICK R · 2009 to 2010
$396k
NHLBI NIH HHS T32 HL007751NIBIB NIH HHS EB009235NIBIB NIH HHS R01 EB004537NIBIB NIH HHS R21 EB009235NIGMS NIH HHS T32 GM065086
6 · The paper itself

Abstract

In traditional immuno-polymerase chain reaction (immuno-PCR), a single antibody recognition event is associated with one to three DNA tags, which are subsequently amplified by PCR. Here we describe a nanoparticle-amplified immuno-PCR (NPA-IPCR) assay that combines antibody recognition of enzyme-linked immunosorbent assay (ELISA) with a 50-fold nanoparticle valence amplification step prior to tag amplification by PCR. The assay detects a respiratory syncytial virus (RSV) surface protein using an antibody bound to a 15-nm gold nanoparticle cofunctionalized with thiolated DNA complementary to a hybridized 76-base tag DNA with a tag DNA/antibody ratio of 50:1. The presence of virus particles triggers the formation of a "sandwich" complex composed of the gold nanoparticle construct, virus, and an antibody-functionalized magnetic particle used for extraction. After extraction, DNA tags are released by heating to 95°C and detected via real-time PCR. The limit of detection of the assay was compared with ELISA and reversion transcription (RT) PCR using RSV-infected HEp-2 cell extracts. NPA-IPCR showed an approximately 4000-fold improvement in the limit of detection compared with ELISA and a 4-fold improvement compared with viral RNA extraction followed by traditional RT-PCR. NPA-IPCR offers a viable platform for the development of early-stage diagnostics requiring an exceptionally low limit of detection.

Indexed as

AnimalsAntibodiesAntigensBase SequenceBiosensing TechniquesCell ExtractsCell LineDNA, ViralGoldImmunoassayLimit of DetectionMetal NanoparticlesPolymerase Chain ReactionQuartz Crystal Microbalance TechniquesReproducibility of ResultsRespiratory Syncytial VirusesAntibodiesAntigensCell ExtractsDNA, ViralGold

Identifiers

PMID21111702
PMCPMC4208676
OpenAlexW2739368492

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.