Evidence map›Paper›PMID 21110837›Full record

ArticleVirology journal2010

Detection and characterization of two chimpanzee polyomavirus genotypes from different subspecies.

Ilona Deuzing, Zahra Fagrouch, Marlous J Groenewoud, Henk Niphuis, Ivanela Kondova, Willy Bogers, Ernst J Verschoor

Open access · goldAbstract read
In one paragraph

Article in Virology journal, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 27 citations in OpenAlex.

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  10. A cornucopia of human polyomaviruses.Nature reviews. Microbiology · 2013
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Ilona DeuzingDepartment of Virology, Biomedical Primate Research Centre (BPRC), Rijswijk, The Netherlands.
Zahra Fagrouch
Marlous J Groenewoud
Henk Niphuis
Ivanela Kondova
Willy Bogers
Ernst J Verschoor
Biomedical Primate Research Centre · NLUniversity Medical Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The complete nucleotide sequences of three chimpanzee polyomavirus genetic variants were determined. Phylogenetic analysis indicated that the viruses form two different genotypes of ChPyV. Comparison with other primate polyomaviruses revealed a putative agnogene, and an unusually long VP1 open reading frame. The transcriptional control regions (TCR) of the viruses were extremely short (155 nucleotides), and highly conserved amongst the genotypes. Analysis of the TCR from different chimpanzee subspecies, and from a series of tissues from five individuals confirmed its genetic stability, and also indicates that double-infections with different genotypes can occur.

Indexed as

AnimalsCluster AnalysisDNA, ViralFemaleGenotypeMaleMolecular Sequence DataPan troglodytesPhylogenyPolyomavirusSequence Analysis, DNATranscription, GeneticViral ProteinsDNA, ViralViral Proteins

Identifiers

PMID21110837
PMCPMC3003640
OpenAlexW2130309767

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.