Evidence map›Paper›PMID 21110323›Full record

ArticleProteomics2010

Assaying pharmacodynamic endpoints with targeted therapy: flavopiridol and 17AAG induced dephosphorylation of histone H1.5 in acute myeloid leukemia.

Liwen Wang, Sean W Harshman, Shujun Liu, Chen Ren, Hua Xu, Larry Sallans, Michael Grever, John C Byrd, Guido Marcucci, Michael A Freitas

Open access · greenAbstract read
In one paragraph

Article in Proteomics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Histone H1 phosphorylation in breast cancer.Journal of proteome research · 2014
    Article
  8. Article
  9. Review
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Liwen WangDepartment of Chemistry, The Ohio State University, Columbus OH, USA.
Sean W Harshman
Shujun Liu
Chen Ren
Hua Xu
Larry Sallans
Michael Grever
John C Byrd
Guido Marcucci
Michael A Freitas
The Ohio State University · USUniversity of Cincinnati · US

Funding

PathologyP01CA101956 · NCI · OHIO STATE UNIVERSITY · PI BYRD, JOHN C. · 2006 to 2010
$11.4M
Assays for Screening Histone Modifications in CancerR01CA107106 · NCI · OHIO STATE UNIVERSITY · PI FREITAS, MICHAEL A. · 2004 to 2013
$1.8M
Acquisition of a high-throughput high mass accuracy MS for chromatin researchS10RR023647 · NCRR · OHIO STATE UNIVERSITY · PI FREITAS, MICHAEL A · 2007 to 2007
$500k
Assays for Screening Histone Modificaitons in CancerR56CA107106 · NCI · OHIO STATE UNIVERSITY · PI FREITAS, MICHAEL A. · 2009 to 2009
$231k
NCI NIH HHS CA101956NCI NIH HHS CA107106NCI NIH HHS P01 CA101956NCI NIH HHS R01 CA107106NCI NIH HHS R56 CA107106NCRR NIH HHS RR023647NCRR NIH HHS S10 RR023647
6 · The paper itself

Abstract

Histone H1 is commonly used to assay kinase activity in vitro. As many promising targeted therapies affect kinase activity of specific enzymes involved in cancer transformation, H1 phosphorylation can serve as potential pharmacodynamic marker for drug activity within the cell. In this study we utilized a phosphoproteomic workflow to characterize histone H1 phosphorylation changes associated with two targeted therapies in the Kasumi-1 acute myeloid leukemia cell line. The phosphoproteomic workflow was first validated with standard casein phosphoproteins and then applied to the direct analysis of histone H1 from Kasumi-1 nuclear lysates. Ten H1 phosphorylation sites were identified on the H1 variants, H1.2, H1.3, H1.4, H1.5 and H1.x. LC MS profiling of intact H1s demonstrated global dephosphorylation of H1.5 associated with therapy by the cyclin-dependent kinase inhibitor, flavopiridol and the Heat Shock Protein 90 inhibitor, 17-(Allylamino)-17-demethoxygeldanamycin. In contrast, independent treatments with a nucleotide analog, proteosome inhibitor and histone deacetylase inhibitor did not exhibit decreased H1.5 phosphorylation. The data presented herein demonstrate that potential of histones to assess the cellular response of reagents that have direct and indirect effects on kinase activity that alters histone phosphorylation. As such, this approach may be a highly informative marker for response to targeted therapies influencing histone phosphorylation.

Indexed as

Amino Acid SequenceBenzoquinonesBiomarkers, PharmacologicalCaseinsFlavonoidsHistonesHSP90 Heat-Shock ProteinsHumansLactams, MacrocyclicLeukemia, Myeloid, AcuteMolecular Sequence DataMolecular Targeted TherapyPhosphopeptidesPiperidinesProtein Kinase InhibitorsTumor Cells, CulturedalvocidibBenzoquinonesBiomarkers, PharmacologicalCaseinsFlavonoidsHistonesHSP90 Heat-Shock ProteinsLactams, MacrocyclicPhosphopeptidesPiperidinesProtein Kinase Inhibitorstanespimycin

Identifiers

PMID21110323
PMCPMC3021470
OpenAlexW2030852779

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.