Evidence map›Paper›PMID 21109226›Full record

ArticleAmerican journal of human genetics2010

Recurrent distal 7q11.23 deletion including HIP1 and YWHAG identified in patients with intellectual disabilities, epilepsy, and neurobehavioral problems.

Melissa B Ramocki, Magdalena Bartnik, Przemyslaw Szafranski, Katarzyna E Kołodziejska, Zhilian Xia, Jaclyn Bravo, G Steve Miller, Diana L Rodriguez, Charles A Williams, Patricia I Bader and 18 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 1 synthesis or guideline pooled it, 97 citations in OpenAlex.

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  14. Williams syndrome.Nature reviews. Disease primers · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

28 authors at 9 institutions in 2 countries.

Melissa B RamockiDepartment of Pediatrics, Baylor College of Medicine, Houston, TX 77030, USA.
Magdalena Bartnik
Przemyslaw Szafranski
Katarzyna E Kołodziejska
Zhilian Xia
Jaclyn Bravo
G Steve Miller
Diana L Rodriguez
Charles A Williams
Patricia I Bader
Elżbieta Szczepanik
Tomasz Mazurczak
Dorota Antczak-Marach
James G Coldwell
Cigdem I Akman
Karen McAlmon
Melinda P Cohen
James McGrath
Elizabeth Roeder
Jennifer Mueller
Sung-Hae L Kang
Carlos A Bacino
Ankita Patel
Ewa Bocian
Chad A Shaw
Sau Wai Cheung
Tadeusz Mazurczak
Paweł Stankiewicz
Baylor College of Medicine · USMother and Child Foundation · GBChildren's Medical Center · USUniversity of Florida · USCounseling Center · USHarvard University · USThe University of Texas Health Science Center at San Antonio · USVanderbilt University · USYale University · US

Funding

PROGRAM IN HUMAN MOLECULAR GENETICST32GM008307 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI SHAULSKY, GAD · 1990 to 2020
$6.6M
Pathophysiology of MECP2 Spectrum Disorders (Career Development Award Proposal)K08NS062711 · NINDS · BAYLOR COLLEGE OF MEDICINE · PI RAMOCKI, MELISSA BETH · 2008 to 2012
$861k
NIGMS NIH HHS T32 GM008307NIGMS NIH HHS T32GM008307NINDS NIH HHS 5K08NS062711-03NINDS NIH HHS K08 NS062711
6 · The paper itself

Abstract

We report 26 individuals from ten unrelated families who exhibit variable expression and/or incomplete penetrance of epilepsy, learning difficulties, intellectual disabilities, and/or neurobehavioral abnormalities as a result of a heterozygous microdeletion distally adjacent to the Williams-Beuren syndrome region on chromosome 7q11.23. In six families with a common recurrent ∼1.2 Mb deletion that includes the Huntingtin-interacting protein 1 (HIP1) and tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma (YWHAG) genes and that is flanked by large complex low-copy repeats, we identified sites for nonallelic homologous recombination in two patients. There were no cases of this ∼1.2 Mb distal 7q11.23 deletion copy number variant identified in over 20,000 control samples surveyed. Three individuals with smaller, nonrecurrent deletions (∼180-500 kb) that include HIP1 but not YWHAG suggest that deletion of HIP1 is sufficient to cause neurological disease. Mice with targeted mutation in the Hip1 gene (Hip1⁻(/)⁻) develop a neurological phenotype characterized by failure to thrive, tremor, and gait ataxia. Overall, our data characterize a neurodevelopmental and epilepsy syndrome that is likely caused by recurrent and nonrecurrent deletions, including HIP1. These data do not exclude the possibility that YWHAG loss of function is also sufficient to cause neurological phenotypes. Based on the current knowledge of Hip1 protein function and its proposed role in AMPA and NMDA ionotropic glutamate receptor trafficking, we believe that HIP1 haploinsufficiency in humans will be amenable to rational drug design for improved seizure control and cognitive and behavioral function.

Indexed as

Chromosome DeletionChromosomes, Human, Pair 7AdolescentAdultAnimalsChildChild, PreschoolDNA-Binding ProteinsDNA Copy Number VariationsEpilepsyFemaleHumansInfantIntellectual DisabilityMaleMental DisordersDNA-Binding ProteinsHIP1 protein, human

Identifiers

PMID21109226
PMCPMC2997378
OpenAlexW2056124578

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.