Evidence map›Paper›PMID 21109225›Full record

ArticleAmerican journal of human genetics2010

Whole-exome-sequencing-based discovery of human FADD deficiency.

Alexandre Bolze, Minji Byun, David McDonald, Neil V Morgan, Avinash Abhyankar, Lakshmanane Premkumar, Anne Puel, Chris M Bacon, Frédéric Rieux-Laucat, Ki Pang and 7 more

Open access · bronzeAbstract read
In one paragraph

Article in American journal of human genetics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 99 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
99citing papers in PubMed, 1 pooled it
10.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

99 citing papers in PubMed, 1 synthesis or guideline pooled it, 184 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Whole-exome sequencing to analyze population structure, parental inbreeding, and familial linkage.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Trial
  4. Trial
  5. Article
  6. Article
  7. Monogenic disorders of the TNF signalling pathway.Nature reviews. Rheumatology · 2026
    Review
  8. Article
  9. Somatic mosaicism in genetic errors of immunity.The Journal of allergy and clinical immunology · 2025
    Review
  10. Review
  11. Article
  12. Article
  13. Infections in Disorders of Immune Regulation.Pathogens (Basel, Switzerland) · 2024
    Review
  14. Review
  15. Review
  16. Article
  17. Review
  18. Review
  19. Article
  20. Article

39 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 10 institutions in 3 countries.

Alexandre BolzeThe Rockefeller University, New York, NY 10065, USA.
Minji Byun
David McDonald
Neil V Morgan
Avinash Abhyankar
Lakshmanane Premkumar
Anne Puel
Chris M Bacon
Frédéric Rieux-Laucat
Ki Pang
Alison Britland
Laurent Abel
Andrew Cant
Eamonn R Maher
Stefan J Riedl
Sophie Hambleton
Jean-Laurent Casanova
Great North Children's Hospital · GBInserm · FRRockefeller University · USSanford Burnham Prebys Medical Discovery Institute · USAiredale General Hospital · GBBirmingham Women's Hospital · GBDélégation Paris 5 · FRNewcastle University · GBNewcastle upon Tyne Hospital · GBUniversity of Birmingham · GB

Funding

TRANSFORMING TRANSLATIONAL SCIENCE AND EDUCATION TO BENEFIT HUMAN HEALTHUL1RR024143 · NCRR · ROCKEFELLER UNIVERSITY · PI COLLER, BARRY · 2006 to 2011
$49.1M
The Mechanism of DISC FormationR01AA017238 · NIAAA · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI RIEDL, STEFAN J · 2008 to 2012
$2.1M
Medical Research Council G0701897NCRR NIH HHS 5UL1RR024143-03NCRR NIH HHS UL1 RR024143NIAAA NIH HHS R01 AA017238NIAAA NIH HHS R01AA017238
6 · The paper itself

Abstract

Germline mutations in FASL and FAS impair Fas-dependent apoptosis and cause recessively or dominantly inherited autoimmune lymphoproliferative syndrome (ALPS). Patients with ALPS typically present with no other clinical phenotype. We investigated a large, consanguineous, multiplex kindred in which biological features of ALPS were found in the context of severe bacterial and viral disease, recurrent hepatopathy and encephalopathy, and cardiac malformations. By a combination of genome-wide linkage and whole-exome sequencing, we identified a homozygous missense mutation in FADD, encoding the Fas-associated death domain protein (FADD), in the patients. This FADD mutation decreases steady-state protein levels and impairs Fas-dependent apoptosis in vitro, accounting for biological ALPS phenotypes in vivo. It also impairs Fas-independent signaling pathways. The observed bacterial infections result partly from functional hyposplenism, and viral infections result from impaired interferon immunity. We describe here a complex clinical disorder, its genetic basis, and some of the key mechanisms underlying its pathogenesis. Our findings highlight the key role of FADD in Fas-dependent and Fas-independent signaling pathways in humans.

Indexed as

ExonsSequence Analysis, DNAAmino Acid SequenceAnimalsAutoimmune Lymphoproliferative SyndromeFas-Associated Death Domain ProteinFemaleHumansMaleMolecular Sequence DataMutation, MissensePedigreeSequence Homology, Amino AcidFADD protein, humanFas-Associated Death Domain Protein

Identifiers

PMID21109225
PMCPMC2997374
OpenAlexW2070923918

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.