Evidence map›Paper›PMID 21108392›Full record

ArticleAmerican journal of medical genetics. Part A2010

Recurrent interstitial 1p36 deletions: Evidence for germline mosaicism and complex rearrangement breakpoints.

Marzena Gajecka, Sulagna C Saitta, Andrew J Gentles, Lindsey Campbell, Karen Ciprero, Elizabeth Geiger, Anne Catherwood, Jill A Rosenfeld, Tamim Shaikh, Lisa G Shaffer

Open access · greenAbstract readCase ReportsComparative Study
In one paragraph

Article in American journal of medical genetics. Part A, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
10.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 109 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Psychiatric Comorbidities in 1p36 Deletion Syndrome and Their Treatment-A Case Report.International journal of environmental research and public health · 2021
    Article
  6. Article
  7. Unrevealed mosaicism in the next-generation sequencing era.Molecular genetics and genomics : MGG · 2016
    Review
  8. 1p36 deletion syndrome: an update.The application of clinical genetics · 2015
    Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Genetics of sudden cardiac death syndromes.Current opinion in cardiology · 2011
    Review
  16. Article
  17. Breaking new ground: ExploringInternational journal of health sciences
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Marzena GajeckaInstitute of Human Genetics, Polish Academy of Sciences, Poznan, Poland.
Sulagna C Saitta
Andrew J Gentles
Lindsey Campbell
Karen Ciprero
Elizabeth Geiger
Anne Catherwood
Jill A Rosenfeld
Tamim Shaikh
Lisa G Shaffer
Children's Hospital of Philadelphia · USSignature Research (United States) · USUniversity of Pennsylvania · USPolish Academy of Sciences · PLStanford University · US

Funding

Copy Number Alterations in Genomic DisordersR01GM081519 · NIGMS · UNIVERSITY OF COLORADO DENVER · PI SHAIKH, TAMIM H · 2007 to 2010
$2.4M
NIGMS NIH HHS GM081519NIGMS NIH HHS R01 GM081519
6 · The paper itself

Abstract

Deletions of chromosome 1p36 are one of the most frequently encountered subtelomeric alterations. Clinical features of monosomy 1p36 include neurocognitive impairment, hearing loss, seizures, cardiac defects, and characteristic facial features. The majority of cases have occurred sporadically, implying that genomic instability plays a role in the prevalence of the syndrome. Here, we report two siblings with mild phenotypic features of the deletion syndrome, including developmental delay, hearing loss, and left ventricular non-compaction (LVNC). Microarray analysis using bacterial artificial chromosome and oligonucleotide microarrays indicated the deletions were identical, suggesting germline mosaicism. Parental phenotypes were normal, and analysis by fluorescence in situ hybridization (FISH) did not show mosaicism. These small interstitial deletions were not detectable by conventional subtelomeric FISH analysis. To investigate the mechanism of deletion further, the breakpoints were cloned and sequenced, demonstrating the presence of a complex rearrangement. Sequence analysis of genes in the deletion interval did not reveal any mutations on the intact homologue that may have contributed to the LVNC seen in both children. This is the first report of apparent germline mosaicism for this disorder. Thus, our findings have important implications for diagnostic approaches and for recurrence risk counseling in families with a child with monosomy 1p36. In addition, our results further refine the minimal critical region for LVNC and hearing loss.

Indexed as

Chromosome BreakageChromosomes, Human, Pair 1MosaicismSequence DeletionAbnormalities, MultipleChild, PreschoolChromosomes, Artificial, BacterialComparative Genomic HybridizationDevelopmental DisabilitiesDNAFemaleGene RearrangementHumansInfantIn Situ Hybridization, FluorescenceMicroarray AnalysisDNA

Identifiers

PMID21108392
PMCPMC3058890
OpenAlexW2047256271

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.