Evidence map›Paper›PMID 21107318›Full record

Trial reportClinical pharmacology and therapeutics2011

Glycine and a glycine dehydrogenase (GLDC) SNP as citalopram/escitalopram response biomarkers in depression: pharmacometabolomics-informed pharmacogenomics.

Y Ji, S Hebbring, H Zhu, G D Jenkins, J Biernacka, K Snyder, M Drews, O Fiehn, Z Zeng, D Schaid and 3 more

Abstract readClinical TrialValidation Study
In one paragraph

Trial report in Clinical pharmacology and therapeutics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 83 papers.

0numbers the graph read from it
0cells of the map it votes in
83citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

83 citing papers in PubMed, 159 citations in OpenAlex.

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23 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 1 country.

Y JiDivision of Clinical Pharmacology, Department of Molecular Pharmacology and Experimental Therapeutics, Mayo Clinic, Rochester, Minnesota, USA.
S Hebbring
H Zhu
G D Jenkins
J Biernacka
K Snyder
M Drews
O Fiehn
Z Zeng
D Schaid
D A Mrazek
R Kaddurah-Daouk
R M Weinshilboum
Mayo Clinic · USMayo Clinic in Florida · USNorth Carolina State University · USDuke University · USUniversity of California, Davis · US

Funding

PHARMACOGENETICS OF PHASE II DRUG METABOLIZING ENZYMESU01GM061388 · NIGMS · MAYO CLINIC ROCHESTER · PI WEINSHILBOUM, RICHARD M. · 2000 to 2009
$15.7M
Mayo Clinic Center for Translational Science ActivitiesKL2RR024151 · NCRR · MAYO CLINIC ROCHESTER · PI RIZZA, ROBERT A. · 2006 to 2011
$15.3M
INHERITED VARIATIONS IN DRUG-METABOLIZING ENZYMESR01GM028157 · NIGMS · MAYO CLINIC ROCHESTER · PI WEINSHILBOUM, RICHARD M. · 1985 to 2019
$6.9M
The Mayo Clinic Center for Individualized Treatment of Alcohol DependenceP20AA017830 · NIAAA · MAYO CLINIC ROCHESTER · PI CHOI, DOO-SUP · 2009 to 2010
$2.5M
Metabolomics Network for Drug Response PhenotypeR24GM078233 · NIGMS · DUKE UNIVERSITY · PI KADDURAH-DAOUK, RIMA F · 2007 to 2010
$2.1M
NCRR NIH HHS 1 KL2RR024151NCRR NIH HHS KL2 RR024151NIAAA NIH HHS P20 1P20AA017830-01NIAAA NIH HHS P20 AA017830NIGMS NIH HHS R01 GM028157NIGMS NIH HHS R01 GM28157NIGMS NIH HHS R24 GM078233NIGMS NIH HHS R24GM78233NIGMS NIH HHS U01 GM061388NIGMS NIH HHS U01 GM61388
6 · The paper itself

Abstract

Major depressive disorder (MDD) is a common psychiatric disease. Selective serotonin reuptake inhibitors (SSRIs) are an important class of drugs used in the treatment of MDD. However, many patients do not respond adequately to SSRI therapy. We used a pharmacometabolomics-informed pharmacogenomic research strategy to identify citalopram/escitalopram treatment outcome biomarkers. Metabolomic assay of plasma samples from 20 escitalopram remitters and 20 nonremitters showed that glycine was negatively associated with treatment outcome (P = 0.0054). This observation was pursued by genotyping tag single-nucleotide polymorphisms (SNPs) for genes encoding glycine synthesis and degradation enzymes, using 529 DNA samples from SSRI-treated MDD patients. The rs10975641 SNP in the glycine dehydrogenase (GLDC) gene was associated with treatment outcome phenotypes. Genotyping for rs10975641 was carried out in 1,245 MDD patients in the Sequenced Treatment Alternatives to Relieve Depression (STAR*D) study, and its presence was significant (P = 0.02) in DNA taken from these patients. These results highlight a possible role for glycine in SSRI response and illustrate the use of pharmacometabolomics to "inform" pharmacogenomics.

Indexed as

Biomarkers, PharmacologicalCell LineChromosomes, Human, Pair 9CitalopramDNA-Binding ProteinsDrug MonitoringFemaleGenetic Association StudiesGlycineGlycine Dehydrogenase (Decarboxylating)HumansIntronsLinkage DisequilibriumMajor Depressive DisorderMaleMetabolomeBiomarkers, PharmacologicalCitalopramDNA-Binding ProteinsGlycineGlycine Dehydrogenase (Decarboxylating)Nuclear ProteinsSelective Serotonin Reuptake Inhibitors

Identifiers

PMID21107318
PMCPMC3034442
OpenAlexW2113638381

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.