Evidence map›Paper›PMID 21103054›Full record

ArticlePloS one2010

Identification of Saccharomyces cerevisiae spindle pole body remodeling factors.

Kristen B Greenland, Huiming Ding, Michael Costanzo, Charles Boone, Trisha N Davis

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Kristen B GreenlandDepartment of Biochemistry, University of Washington, Seattle, Washington, United States of America.
Huiming Ding
Michael Costanzo
Charles Boone
Trisha N Davis
University of Toronto · CAUniversity of Washington · US

Funding

TRAINING IN MOLECULAR AND CELLULAR BIOLOGYT32GM007270 · NIGMS · UNIVERSITY OF WASHINGTON · PI RAIBLE, DAVID W · 1985 to 2020
$21.0M
MOLECULAR ANALYSIS OF THE SPINDLE POLE BODYR01GM040506 · NIGMS · UNIVERSITY OF WASHINGTON · PI DAVIS, TRISHA N. · 1988 to 2018
$8.6M
CIHR GSP-41567NIGMS NIH HHS R01 GM040506NIGMS NIH HHS R01GM40506NIGMS NIH HHS T32 GM007270NIGMS NIH HHS T32 GM07270
6 · The paper itself

Abstract

The Saccharomyces cerevisiae centrosome or spindle pole body (SPB) is a dynamic structure that is remodeled in a cell cycle dependent manner. The SPB increases in size late in the cell cycle and during most cell cycle arrests and exchanges components during G1/S. We identified proteins involved in the remodeling process using a strain in which SPB remodeling is conditionally induced. This strain was engineered to express a modified SPB component, Spc110, which can be cleaved upon the induction of a protease. Using a synthetic genetic array analysis, we screened for genes required only when Spc110 cleavage is induced. Candidate SPB remodeling factors fell into several functional categories: mitotic regulators, microtubule motors, protein modification enzymes, and nuclear pore proteins. The involvement of candidate genes in SPB assembly was assessed in three ways: by identifying the presence of a synthetic growth defect when combined with an Spc110 assembly defective mutant, quantifying growth of SPBs during metaphase arrest, and comparing distribution of SPB size during asynchronous growth. These secondary screens identified four genes required for SPB remodeling: NUP60, POM152, and NCS2 are required for SPB growth during a mitotic cell cycle arrest, and UBC4 is required to maintain SPB size during the cell cycle. These findings implicate the nuclear pore, urmylation, and ubiquitination in SPB remodeling and represent novel functions for these genes.

Indexed as

Calmodulin-Binding ProteinsCell CycleCell Cycle ProteinsCentrosomeCytoskeletal ProteinsGreen Fluorescent ProteinsMembrane GlycoproteinsMicroscopy, FluorescenceMutationNuclear PoreNuclear Pore Complex ProteinsNuclear ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSpindle ApparatusUbiquitin-Conjugating EnzymesCalmodulin-Binding ProteinsCell Cycle ProteinsCytoskeletal ProteinsGreen Fluorescent ProteinsMembrane GlycoproteinsNCS2 protein, S cerevisiaeNuclear Pore Complex ProteinsNuclear ProteinsNup60 protein, S cerevisiaePOM152 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSPC110 protein, S cerevisiaeUbc4 protein, S cerevisiaeUbiquitin-Conjugating Enzymes

Identifiers

PMID21103054
PMCPMC2980476
OpenAlexW2092350046

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.