Evidence map›Paper›PMID 21102338›Full record

ArticleEuropean journal of cancer prevention : the official journal of the European Cancer Prevention Organisation (ECP)2011

Possible association between a genetic polymorphism at 8q24 and risk of upper gastrointestinal cancer.

Paul Lochhead, Michael T H Ng, Georgina L Hold, Charles S Rabkin, Thomas L Vaughan, Marilie D Gammon, Harvey A Risch, Jolanta Lissowska, Indrani Mukhopadhya, Wong-Ho Chow and 1 more

Abstract read
In one paragraph

Article in European journal of cancer prevention : the official journal of the European Cancer Prevention Organisation (ECP), 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 2 pooled it
0.7field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 2 syntheses or guidelines pooled it, 16 citations in OpenAlex.

  1. Pooled it
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  5. Association between polymorphisms in long non-coding RNA PRNCR1 in 8q24 and risk of gastric cancer.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2016
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 8 institutions in 5 countries.

Paul LochheadGastrointestinal Research Group, Institute of Medical Sciences, University of Aberdeen, Scotland.
Michael T H Ng
Georgina L Hold
Charles S Rabkin
Thomas L Vaughan
Marilie D Gammon
Harvey A Risch
Jolanta Lissowska
Indrani Mukhopadhya
Wong-Ho Chow
Emad M El-Omar
University of Aberdeen · GBCape Town HVTN Immunology Laboratory / Hutchinson Centre Research Institute of South Africa · ZAInstitute of Medical Sciences · INNational Cancer Institute · USNational Institutes of Health · USThe Maria Sklodowska-Curie National Research Institute of Oncology · PLUniversity of North Carolina at Chapel Hill · USYale University · US

Funding

UNC-CH CENTER FOR ENVIRONMENTAL HEALTH &SUSCEPTIBILITYP30ES010126 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Melissa A. Troester · 2001 to 2026
$36.3M
Molecular mechanisms of infection-related cancerZIACP010212 · NCI · DIVISION OF CANCER EPIDEMIOLOGY AND GENETICS · PI ENGELS, ERIC A · 2010 to 2025
$4.6M
SURVEILLANCE EPIDEMIOLOGY AND END RESULTSN01CN005230 · CN · FRED HUTCHINSON CANCER RESEARCH CENTER · PI THOMAS, DAVID B · 1990 to 1996
–
EPIDEMIOLOGIC STUDY OF ADENOCARCINOMAS OF THE ESOPHAGUSU01CA057949 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI VAUGHAN, THOMAS L · 1992 to 1995
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ADENOCARCINOMAS OF THE ESOPHAGUS AND GASTRIC CARDIAU01CA057983 · NCI · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI GAMMON, MARILIE D · 1992 to 1995
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EPIDEMIOLOGIC STUDY OF ESOPHAGEAL/GASTRIC ADENOCARCINOMAU01CA057923 · NCI · YALE UNIVERSITY · PI RISCH, HARVEY A · 1992 to 1995
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BIOSTATISTICAL &ANALYTICAL SUPPORT SERVICESN01CP040501 · CP · WESTAT, INC. · PI LANNOM, LINDA B · 1994 to 1996
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Chief Scientist Office CAF/10/15Intramural NIH HHS Z99 CA999999NCI NIH HHS N01 CN005230NCI NIH HHS N01-CN05230NCI NIH HHS N01 CP040501NCI NIH HHS N02-CP40501NCI NIH HHS U01 CA057923NCI NIH HHS U01 CA057949NCI NIH HHS U01 CA057983NIEHS NIH HHS P30 ES010126NIEHS NIH HHS P30ES10126
6 · The paper itself

Abstract

Over recent years, genome-wide association studies have contributed to our understanding of genetic susceptibility to sporadic cancer. In this study, we assessed the association between upper gastrointestinal cancer risk and four genome-wide association studies-identified single nucleotide polymorphisms (SNPs), implicated earlier in prostate and colorectal cancer susceptibility. Genotyping for each SNP was performed in two independent Caucasian population-based case-control studies. The first study comprised 290 gastric cancer cases and 374 controls. The second study included 185 noncardia gastric cancers, 123 cardia cancers, 158 oesophageal cancers and 209 controls. Odds ratios (ORs) were computed from logistic models and adjusted for potential confounding variables. An inverse association was observed between the SNP rs1447295, located at 8q24, and gastric cancer risk in the first study population (OR=0.63; 95% confidence interval: 0.41-0.97). A positive association was observed for the same SNP and oesophageal squamous cell carcinoma in the second study population (OR=7.43; 95% confidence interval: 1.37-49.98). No significant associations were detected in either study for the three remaining SNPs (rs6983297, rs10505477 and rs719725). Our data represent novel findings on heritable susceptibility to gastric and oesophageal cancer and warrant validation in additional populations.

Indexed as

Genetic Predisposition to DiseasePolymorphism, Single NucleotideCarcinoma, Squamous CellCase-Control StudiesChromosomes, Human, Pair 8Esophageal NeoplasmsGenome-Wide Association StudyGenotypeHumansPolandStomach NeoplasmsUnited States

Identifiers

PMID21102338
PMCPMC3020097
OpenAlexW2018701645

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.