Evidence map›Paper›PMID 21098485›Full record

ArticleThe Journal of biological chemistry2011

In vitro selection and characterization of HIV-1 variants with increased resistance to sifuvirtide, a novel HIV-1 fusion inhibitor.

Zhonghua Liu, Mei Shan, Li Li, Lu Lu, Shu Meng, Cheng Chen, Yuxian He, Shibo Jiang, Linqi Zhang

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Zhonghua LiuAIDS Research Center, Institute of Pathogen Biology, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100730, China.
Mei Shan
Li Li
Lu Lu
Shu Meng
Cheng Chen
Yuxian He
Shibo Jiang
Linqi Zhang
Chinese Academy of Medical Sciences & Peking Union Medical College · CNNew York Blood Center · USTsinghua University · CN

Funding

Rational Design of HIV Fusion Inhibitors Targeting gp41R01AI046221 · NIAID · NEW YORK BLOOD CENTER · PI JIANG, SHIBO · 2000 to 2010
$3.3M
Rational Design of HIV Fusion Inhibitors Targeting gp41R21AI046221 · NIAID · NEW YORK BLOOD CENTER · PI JIANG, SHIBO · 2004 to 2004
$312k
NIAID NIH HHS AI046221NIAID NIH HHS R01 AI046221NIAID NIH HHS R21 AI046221
6 · The paper itself

Abstract

Sifuvirtide, a novel fusion inhibitor against human immunodeficiency virus type I (HIV-1), which is more potent than enfuvirtide (T20) in cell culture, is currently under clinical investigation for the treatment of HIV-1 infection. We now report that in vitro selection of HIV-1 variants resistant to sifuvirtide in the presence of increasing concentrations of sifuvirtide has led to several specific mutations in the gp41 region that had not been previously reported. Many of these substitutions were confined to the N-terminal heptad repeat region at positions 37, 38, 41, and 43, either singly or in combination. A downstream substitution at position 126 (N126K) in the C-terminal heptad repeat region was also found. Site-directed mutagenesis studies have further identified the critical amino acid substitutions and combinations thereof in conferring the resistant genotypes. Furthermore, the mutant viruses demonstrated variable degrees of cross-resistance to enfuvirtide, some of which are preferentially more resistant to sifuvirtide. Impaired infectivity was also found for many of the mutant viruses. Biophysical and structural analyses of the key substitutions have revealed several potential novel mechanisms against sifuvirtide. Our results may help to predict potential resistant patterns in vivo and facilitate the further clinical development and therapeutic utility of sifuvirtide.

Indexed as

MutationAmino Acid SubstitutionCross ReactionsDrug Resistance, ViralEnfuvirtideGenetic VariationHIV-1HIV Envelope Protein gp41HIV Fusion InhibitorsHumansMutagenesis, Site-DirectedPeptide FragmentsPeptidesEnfuvirtideHIV Envelope Protein gp41HIV Fusion InhibitorsPeptide FragmentsPeptidessifuvirtide

Identifiers

PMID21098485
PMCPMC3030333
OpenAlexW2088341183

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.