Evidence map›Paper›PMID 21098280›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2010

Tailor-made RNAi knockdown against triplet repeat disease-causing alleles.

Masaki Takahashi, Shoko Watanabe, Miho Murata, Hirokazu Furuya, Ichiro Kanazawa, Keiji Wada, Hirohiko Hohjoh

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 26 citations in OpenAlex.

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  12. Disease-causing allele-specific silencing by RNA interference.Pharmaceuticals (Basel, Switzerland) · 2013
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Masaki TakahashiNational Institute of Neuroscience, National Center of Neurology and Psychiatry, Tokyo 187-8502, Japan.
Shoko Watanabe
Miho Murata
Hirokazu Furuya
Ichiro Kanazawa
Keiji Wada
Hirohiko Hohjoh
National Neuroscience Institute · SGNational Center of Neurology and Psychiatry · JPOmuta hospital · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nucleotide variations, including SNPs, in the coding regions of disease genes are important targets for RNAi treatment, which is a promising medical treatment for intractable diseases such as triplet repeat diseases. However, the identification of such nucleotide variations and the design of siRNAs conferring disease allele-specific RNAi are quite difficult. In this study we developed a pull-down method to rapidly identify coding SNP (cSNP) haplotypes of triple repeat, disease-causing alleles, and we demonstrated disease allele-specific RNAi that targeted cSNP sites in mutant Huntingtin alleles, each of which possessed a different cSNP haplotype. Therefore, the methods presented here allow for allele-specific RNAi knockdown against disease-causing alleles by using siRNAs specific to disease-linked cSNP haplotypes, and advanced progress toward tailor-made RNAi treatments for triplet repeat diseases.

Indexed as

AllelesGene Knockdown TechniquesGenetic Predisposition to DiseaseRNA InterferenceTrinucleotide RepeatsHaplotypesHEK293 CellsHeLa CellsHumansHuntingtin ProteinNerve Tissue ProteinsNuclear ProteinsPolymorphism, Single NucleotideRNA, Small InterferingHTT protein, humanHuntingtin ProteinNerve Tissue ProteinsNuclear ProteinsRNA, Small Interfering

Identifiers

PMID21098280
PMCPMC3003091
OpenAlexW2057178849

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.