Evidence map›Paper›PMID 21097890›Full record

ArticleNucleic acids research2011

Database resources of the National Center for Biotechnology Information.

Eric W Sayers, Tanya Barrett, Dennis A Benson, Evan Bolton, Stephen H Bryant, Kathi Canese, Vyacheslav Chetvernin, Deanna M Church, Michael DiCuccio, Scott Federhen and 32 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 390 papers.

0numbers the graph read from it
0cells of the map it votes in
390citing papers in PubMed
37.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

390 citing papers in PubMed, 642 citations in OpenAlex.

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  20. LICEDB: light industrial core enzyme database for industrial applications and AI enzyme design.Database : the journal of biological databases and curation · 2025
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330 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

42 authors at 1 institution in 2 countries.

Eric W SayersNational Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Building 38A, 8600 Rockville Pike, Bethesda, MD 20894, USA. sayers@ncbi.nlm.nih.gov
Tanya Barrett
Dennis A Benson
Evan Bolton
Stephen H Bryant
Kathi Canese
Vyacheslav Chetvernin
Deanna M Church
Michael DiCuccio
Scott Federhen
Michael Feolo
Ian M Fingerman
Lewis Y Geer
Wolfgang Helmberg
Yuri Kapustin
David Landsman
David J Lipman
Zhiyong Lu
Thomas L Madden
Tom Madej
Donna R Maglott
Aron Marchler-Bauer
Vadim Miller
Ilene Mizrachi
James Ostell
Anna Panchenko
Lon Phan
Kim D Pruitt
Gregory D Schuler
Edwin Sequeira
Stephen T Sherry
Martin Shumway
Karl Sirotkin
Douglas Slotta
Alexandre Souvorov
Grigory Starchenko
Tatiana A Tatusova
Lukas Wagner
Yanli Wang
W John Wilbur
Eugene Yaschenko
Jian Ye
National Institutes of Health · US

Funding

National Biomedical Information ServicesZIHLM200888 · NLM · NATIONAL LIBRARY OF MEDICINE · PI PALTOO, DINA · 2009 to 2025
$5200.7M
Structural Biology Information ResourcesZIALM000046 · NLM · NATIONAL LIBRARY OF MEDICINE · PI BRYANT, STEPHEN H · 2009 to 2017
$45.4M
Chemical Biology Information ResourcesZIALM100604 · NLM · NATIONAL LIBRARY OF MEDICINE · PI BRYANT, STEPHEN H · 2009 to 2017
$39.6M
Structural And Functional Analysis Of Protein Sequence FamiliesZIALM000071 · NLM · NATIONAL LIBRARY OF MEDICINE · PI LANDSMAN, DAVID · 2009 to 2025
$3.7M
Named Entity Recognition and Relationship Extraction in BiomedicineZIALM000002 · NLM · NATIONAL LIBRARY OF MEDICINE · PI LU, ZHIYONG · 2011 to 2012
$1.5M
PubMed Query Log Analysis and Use in Access InhancementZIALM200812 · NLM · NATIONAL LIBRARY OF MEDICINE · PI WILBUR, WILLY · 2009 to 2015
$1.4M
Comparative GenomicsZIALM000077 · NLM · NATIONAL LIBRARY OF MEDICINE · PI LIPMAN, DAVID J. · 2009 to 2017
$1.4M
NLM CCMF allocationZIFLM000001 · NLM · NATIONAL LIBRARY OF MEDICINE · 2011 to 2022
$149k
Intramural NIH HHS
6 · The paper itself

Abstract

In addition to maintaining the GenBank® nucleic acid sequence database, the National Center for Biotechnology Information (NCBI) provides analysis and retrieval resources for the data in GenBank and other biological data made available through the NCBI Web site. NCBI resources include Entrez, the Entrez Programming Utilities, MyNCBI, PubMed, PubMed Central (PMC), Entrez Gene, the NCBI Taxonomy Browser, BLAST, BLAST Link (BLink), Primer-BLAST, COBALT, Electronic PCR, OrfFinder, Splign, ProSplign, RefSeq, UniGene, HomoloGene, ProtEST, dbMHC, dbSNP, dbVar, Epigenomics, Cancer Chromosomes, Entrez Genomes and related tools, the Map Viewer, Model Maker, Evidence Viewer, Trace Archive, Sequence Read Archive, Retroviral Genotyping Tools, HIV-1/Human Protein Interaction Database, Gene Expression Omnibus (GEO), Entrez Probe, GENSAT, Online Mendelian Inheritance in Man (OMIM), Online Mendelian Inheritance in Animals (OMIA), the Molecular Modeling Database (MMDB), the Conserved Domain Database (CDD), the Conserved Domain Architecture Retrieval Tool (CDART), IBIS, Biosystems, Peptidome, OMSSA, Protein Clusters and the PubChem suite of small molecule databases. Augmenting many of the Web applications are custom implementations of the BLAST program optimized to search specialized data sets. All of these resources can be accessed through the NCBI home page at www.ncbi.nlm.nih.gov.

Indexed as

Databases, GeneticDatabases, ProteinGene ExpressionGenomicsNational Library of Medicine (U.S.)Protein Structure, TertiaryPubMedSequence AlignmentSequence Analysis, DNASequence Analysis, RNASoftwareSystems IntegrationUnited States

Identifiers

PMID21097890
PMCPMC3013733
OpenAlexW4244606935

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.