Evidence map›Paper›PMID 21097543›Full record

ArticleMolecular & cellular proteomics : MCP2011

Identification of phosphoproteins associated with human neutrophil granules following chemotactic peptide stimulation.

Gregory C Luerman, David W Powell, Silvia M Uriarte, Timothy D Cummins, Michael L Merchant, Richard A Ward, Kenneth R McLeish

Open access · hybridAbstract read
In one paragraph

Article in Molecular & cellular proteomics : MCP, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

  1. The GRKs Reactome: Role in Cell Biology and Pathology.International journal of molecular sciences · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Gregory C LuermanDepartment of Biochemistry and Molecular Biology, University of Louisville, Louisville, KY 40202, USA.
David W Powell
Silvia M Uriarte
Timothy D Cummins
Michael L Merchant
Richard A Ward
Kenneth R McLeish
University of Louisville · US

Funding

Strategic Vision & Impact on Environmental HealthP30ES014443 · NIEHS · UNIVERSITY OF LOUISVILLE · PI RAMOS, KENNETH S. · 2007 to 2010
$4.4M
Granule exocytosis and neutrophil activationR00HL087924 · NHLBI · UNIVERSITY OF LOUISVILLE · PI URIARTE, SILVIA M · 2011 to 2013
$721k
Granule exocytosis and neutrophil activationK99HL087924 · NHLBI · UNIVERSITY OF LOUISVILLE · PI URIARTE, SILVIA M · 2009 to 2010
$258k
NHLBI NIH HHS HL087924NHLBI NIH HHS K99 HL087924NHLBI NIH HHS R00 HL087924NIDDK NIH HHS DK176743NIEHS NIH HHS P30 ES014443NIEHS NIH HHS P30ES014443
6 · The paper itself

Abstract

Regulated exocytosis of neutrophil intracellular storage granules is necessary for neutrophil participation in the inflammatory response. The signal transduction pathways that participate in neutrophil exocytosis are complex and poorly defined. Several protein kinases, including p38 MAPK and the nonreceptor tyrosine kinases, Hck and Fgr, participate in this response. However, the downstream targets of these kinases that regulate exocytosis are unknown. The present study combined a novel inhibitor of neutrophil exocytosis with proteomic techniques to identify phosphopeptides and phosphoproteins from a population of gelatinase and specific granules isolated from unstimulated and fMLF-stimulated neutrophils. To prevent loss of granule-associated phosphoproteins upon exocytosis, neutrophils were pretreated with a TAT-fusion protein containing a SNARE domain from SNAP-23 (TAT-SNAP-23), which inhibited fMLF-stimulated CD66b-containing granule exocytosis by 100±10%. Following TAT-SNAP-23 pretreatment, neutrophils were stimulated with the chemotactic peptide fMLF for 0 min, 1 min, and 2 min. Granules were isolated by gradient centrifugation and subjected to proteolytic digestion with trypsin or chymotrypsin to obtain peptides from the outer surface of the granule. Phosphopeptides were enriched by gallium or TiO2 affinity chromatography, and phosphopeptides and phosphorylation sites were identified by reversed phase high performance liquid chromatography-electrospray ionization-tandem MS. This resulted in the identification of 243 unique phosphopeptides corresponding to 235 proteins, including known regulators of vesicle trafficking. The analysis identified 79 phosphoproteins from resting neutrophils, 81 following 1 min of fMLF stimulation, and 118 following 2 min of stimulation. Bioinformatic analysis identified a potential Src tyrosine kinase motif from a phosphopeptide corresponding to G protein coupled receptor kinase 5 (GRK5). Phosphorylation of GRK5 by Src was confirmed by an in vitro kinase reaction and by precursor ion scanning for phospho-tyrosine specific immonium ions containing Tyr251 and Tyr253. Immunoprecipitation of phosphorylated GRK5 from intact cells was reduced by a Src inhibitor. In conclusion, targets of signal transduction pathways were identified that are candidates to regulate neutrophil granule exocytosis.

Indexed as

Amino Acid MotifsAmino Acid SequenceChemotaxisComputational BiologyCytoplasmic GranulesExocytosisGene Products, tatG-Protein-Coupled Receptor Kinase 5HumansMolecular Sequence DataNeutrophil ActivationNeutrophilsN-Formylmethionine Leucyl-Phenylalaninep38 Mitogen-Activated Protein KinasesPhosphopeptidesPhosphoproteinsGene Products, tatG-Protein-Coupled Receptor Kinase 5GRK5 protein, humanN-Formylmethionine Leucyl-Phenylalaninep38 Mitogen-Activated Protein KinasesPhosphopeptidesPhosphoproteinsQb-SNARE ProteinsRecombinant Fusion ProteinsSNARE Proteinssrc-Family KinasesTAT-SNAP-23 fusion protein

Identifiers

PMID21097543
PMCPMC3047147
OpenAlexW2098634878

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.