Evidence map›Paper›PMID 21091093›Full record

ArticleScandinavian journal of gastroenterology2011

Polymorphisms in chemokine and receptor genes and gastric cancer risk and survival in a high risk Polish population.

Andrew J Gawron, Angela J Fought, Jolanta Lissowska, Weimin Ye, Xiao Zhang, Wong-Ho Chow, Laura E Beane Freeman, Lifang Hou

Open access · greenAbstract read
In one paragraph

Article in Scandinavian journal of gastroenterology, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 3 pooled it
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 3 syntheses or guidelines pooled it, 22 citations in OpenAlex.

  1. Pooled it
  2. CXCL12 G801A polymorphism and cancer risk: An updated meta-analysis.Journal of Huazhong University of Science and Technology. Medical sciences = Hua zhong ke ji da xue xue bao. Yi xue Ying De wen ban = Huazhong keji daxue xuebao. Yixue Yingdewen ban · 2015
    Pooled it
  3. CCL5-403, CCR5-59029, and Delta32 polymorphisms and cancer risk: a meta-analysis based on 20,625 subjects.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2014
    Pooled it
  4. Trial
  5. Review
  6. Article
  7. Article
  8. C-C motif chemokine receptors in gastric cancer.Molecular and clinical oncology · 2018
    Article
  9. Frequency of CCR5Δ32 allele in healthy Bosniak population.Bosnian journal of basic medical sciences · 2014
    Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 6 institutions in 3 countries.

Andrew J GawronDepartment of Preventive Medicine, Feinberg School of Medicine, Northwestern University, 680 N. Lake Shore Drive, Chicago, IL 60611, USA. agawron@northwestern.edu
Angela J Fought
Jolanta Lissowska
Weimin Ye
Xiao Zhang
Wong-Ho Chow
Laura E Beane Freeman
Lifang Hou
Northwestern University · USRobert H. Lurie Comprehensive Cancer Center of Northwestern UniversityDivision of Cancer Epidemiology and GeneticsKarolinska Institutet · SENational Cancer Institute · USThe Maria Sklodowska-Curie National Research Institute of Oncology · PL

Funding

Cancer Risk in Human PopulationsZIACP010136 · NCI · DIVISION OF CANCER EPIDEMIOLOGY AND GENETICS · PI PURDUE, MARK · 2009 to 2025
$36.7M
CANCER RISK REDUCTION AND DIET--A COHORT STUDY OF WOMENR01CA070867 · NCI · VANDERBILT UNIVERSITY · PI ZHENG, WEI · 1996 to 2007
$4.6M
Soy Food and Coronary Heart Disease in WomenR01HL079123 · NHLBI · VANDERBILT UNIVERSITY · PI SHU, XIAO-OU · 2005 to 2008
$1.7M
Intramural NIH HHSNCI NIH HHS R01 CA070867NHLBI NIH HHS R01 HL079123
6 · The paper itself

Abstract

objectiveTo examine if genetic variations in chemokine receptor and ligand genes are associated with gastric cancer risk and survival.

methodsThe study included 298 cases and 417 controls from a population-based study of gastric cancer conducted in Warsaw, Poland in 1994-1996. We investigated seven single nucleotide polymorphisms in a chemokine ligand (CXCL12) and chemokine receptor (CCR2, CCR5, CX3CR1) genes and one frameshift deletion (CCR5) in blood leukocyte DNA in relation to gastric cancer risk and survival. Genotyping was conducted at the NCI Core Genotyping Facility. Odds ratios and 95% confidence intervals were computed using univariate and multivariate logistic regression models. Survival analysis was performed using Cox proportional hazards models.

resultsGastric cancer risk was not associated with single chemokine polymorphisms. A CCR5 haplotype that contained the common alleles of IVS1+151 G>T (rs2734648), IVS2+80 C>T (rs1800024) and minor allele of IVS1+246 A>G (rs1799987) was associated with a borderline significantly increased risk (OR = 1.5, 95% CI: 1.0?2.2). For gastric cancer cases, there was a greater risk of death for carriers of the minor alleles of CCR2 Ex2+241 G>A (rs1799864) (HR = 1.5, 95% CI: 1.1-2.1) and CCR5 IVS2+80 C>T (rs1800024) (HR = 1.5, 95% CI: 1.1-2.1). Carriers of the CCR5 minor allele of IVS1+151 G>T (rs2734648) had a decreased risk of death compared to homozygote carriers of the common allele (HR = 0.8, 95% CI: 0.6-1.0).

conclusionsOur findings do not support an association between gastric cancer risk and single chemokine genetic variation. The observed associations between cancer risk and a CCR5 haplotype and between survival and polymorphisms in CCR2 and CCR5 need replication in future studies.

Indexed as

Polymorphism, Single NucleotideAdultAgedChemokine CXCL2CX3C Chemokine Receptor 1FemaleFrameshift MutationGenetic Association StudiesGenotypeHumansKaplan-Meier EstimateMaleMiddle AgedOdds RatioPolandProportional Hazards ModelsChemokine CXCL2CX3C Chemokine Receptor 1CX3CR1 protein, humanReceptors, CCR2Receptors, CCR5Receptors, Chemokine

Identifiers

PMID21091093
PMCPMC3035749
OpenAlexW2018975471

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.