Evidence map›Paper›PMID 21089078›Full record

ArticleDevelopmental dynamics : an official publication of the American Association of Anatomists2010

Developmental expression patterns of candidate cofactors for vertebrate six family transcription factors.

Karen M Neilson, Francesca Pignoni, Bo Yan, Sally A Moody

Open access · greenAbstract read
In one paragraph

Article in Developmental dynamics : an official publication of the American Association of Anatomists, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Using Xenopus to discover new candidate genes involved in BOR and other congenital hearing loss syndromes.Journal of experimental zoology. Part B, Molecular and developmental evolution · 2024
    Review
  3. Article
  4. The sulfotransferase XB5850668.L is required to apportion embryonic ectodermal domains.Developmental dynamics : an official publication of the American Association of Anatomists · 2023
    Article
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  14. Article
  15. Using Xenopus to discover new genes involved in branchiootorenal spectrum disorders.Comparative biochemistry and physiology. Toxicology & pharmacology : CBP · 2015
    Review
  16. Transcriptional regulation of cranial sensory placode development.Current topics in developmental biology · 2015
    Review
  17. Article
  18. The Eyes Absent proteins in development and disease.Cellular and molecular life sciences : CMLS · 2013
    Review
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Karen M NeilsonDepartment of Anatomy and Regenerative Biology, The George Washington University, School of Medicine and Health Sciences, Washington, DC 20037, USA. anakmn@gwumc.edu
Francesca Pignoni
Bo Yan
Sally A Moody
George Washington University · USSUNY Upstate Medical University · US

Funding

GENETIC CONTROL OF EYE SPECIFICATIONR01EY013167 · NEI · UPSTATE MEDICAL UNIVERSITY · PI PIGNONI, FRANCESCA · 2000 to 2010
$2.9M
Novel Six1 co-factors and their role in placode developmentR03HD055321 · NICHD · GEORGE WASHINGTON UNIVERSITY · PI NEILSON, KAREN MARY · 2009 to 2010
$156k
NEI NIH HHS R01 EY013167NEI NIH HHS R01 EY1316709NICHD NIH HHS R03 HD055321
6 · The paper itself

Abstract

Six family transcription factors play important roles in craniofacial development. Their transcriptional activity can be modified by cofactor proteins. Two Six genes and one cofactor gene (Eya1) are involved in the human Branchio-otic (BO) and Branchio-otic-renal (BOR) syndromes. However, mutations in Six and Eya genes only account for approximately half of these patients. To discover potential new causative genes, we searched the Xenopus genome for orthologues of Drosophila cofactor proteins that interact with the fly Six-related factor, SO. We identified 33 Xenopus genes with high sequence identity to 20 of the 25 fly SO-interacting proteins. We provide the developmental expression patterns of the Xenopus orthologues for 11 of the fly genes, and demonstrate that all are expressed in developing craniofacial tissues with at least partial overlap with Six1/Six2. We speculate that these genes may function as Six-interacting partners with important roles in vertebrate craniofacial development and perhaps congenital syndromes.

Indexed as

Gene Expression Regulation, DevelopmentalAnimalsComputational BiologyCo-Repressor ProteinsEmbryo, NonmammalianHomeodomain ProteinsIn Situ HybridizationNerve Tissue ProteinsNeural CrestTranscription FactorsXenopus laevisXenopus ProteinsCo-Repressor ProteinsHomeodomain ProteinsNerve Tissue ProteinsSix1 protein, Xenopussix2 protein, XenopusTLE4 protein, XenopusTranscription FactorsXenopus Proteins

Identifiers

PMID21089078
PMCPMC3059517
OpenAlexW2048318561

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.