Evidence map›Paper›PMID 21088112›Full record

ArticleHuman molecular genetics2011

Bidirectional transcription stimulates expansion and contraction of expanded (CTG)*(CAG) repeats.

Masayuki Nakamori, Christopher E Pearson, Charles A Thornton

Open access · bronzeAbstract read
In one paragraph

Article in Human molecular genetics, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
3.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 115 citations in OpenAlex.

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  9. Molecular therapy. Nucleic acids · 2024
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5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Masayuki NakamoriDepartment of Neurology, University of Rochester Medical Center, Rochester, NY 14642, USA.
Christopher E Pearson
Charles A Thornton
University of Rochester Medical Center · USUniversity of Toronto · CA

Funding

Training and Educational CoreU54NS048843 · NINDS · UNIVERSITY OF ROCHESTER · PI THORNTON, CHARLES A · 2003 to 2017
$21.9M
RNA-mediated Mechanisms in the Myotonic DystrophiesR01AR049077 · NIAMS · UNIVERSITY OF ROCHESTER · PI THORNTON, CHARLES A · 2002 to 2011
$3.0M
Integrative Pathophysiology of Myotonic DystrophyK24AR048143 · NIAMS · UNIVERSITY OF ROCHESTER · PI THORNTON, CHARLES A · 2002 to 2012
$1.1M
NIAMS NIH HHS AR049077NIAMS NIH HHS AR48143NIAMS NIH HHS K24 AR048143NINDS NIH HHS NS048843
6 · The paper itself

Abstract

More than 12 neurogenetic disorders are caused by unstable expansions of (CTG)•(CAG) repeats. The expanded repeats are unstable in germline and somatic cells, with potential consequences for disease severity. Previous studies have shown that contractions of (CAG)(95) are more frequent when the repeat tract is transcribed. Here we determined whether transcription can promote repeat expansion, using (CTG)•(CAG) repeat tracts in the size range that is typical for myotonic dystrophy type 1. We derived normal human fibroblasts having single-copy genomic integrations of 800 CTG repeats. The repeat tract showed modest instability when it was not transcribed, yielding an estimated mutation rate of 0.28% per generation. Instability was enhanced several-fold by transcription in the forward or reverse transcription, and 30-fold by bidirectional transcription, yielding many expansions and contractions of more than 200 repeats. These results suggest that convergent bidirectional transcription, which has been reported at several disease loci, could contribute to somatic instability of highly expanded (CTG)•(CAG) repeats.

Indexed as

Genomic InstabilityTranscription, GeneticCell LineFibroblastsGenome, HumanHumansIn Situ Hybridization, FluorescenceMutationMyotonic DystrophyPlasmidsPolymerase Chain ReactionTrinucleotide Repeat Expansion

Identifiers

PMID21088112
PMCPMC3016912
OpenAlexW2125442413

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.