Evidence map›Paper›PMID 21087998›Full record

ArticleNucleic acids research2011

7SK small nuclear RNA directly affects HMGA1 function in transcription regulation.

Sebastian Eilebrecht, Guillaume Brysbaert, Thomas Wegert, Henning Urlaub, Bernd-Joachim Benecke, Arndt Benecke

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 58 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. A positive feedback circuit between RN7SK snRNA and mMolecular therapy : the journal of the American Society of Gene Therapy · 2023
    Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. Structural basis for recognition of human 7SK long noncoding RNA by the La-related protein Larp7.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  12. Article
  13. Article
  14. HMGA1a Induces Alternative Splicing of theFrontiers in molecular biosciences · 2018
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. The new (dis)order in RNA regulation.Cell communication and signaling : CCS · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Sebastian EilebrechtInstitut des Hautes Études Scientifiques & Centre National de la Recherche Scientifique USR3078, 35 route de Chartres, 91440 Bures sur Yvette, France.
Guillaume Brysbaert
Thomas Wegert
Henning Urlaub
Bernd-Joachim Benecke
Arndt Benecke
Centre National de la Recherche Scientifique · FRInstitut des Hautes Études Scientifiques · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Non-coding (nc) RNAs are increasingly recognized to play important regulatory roles in eukaryotic gene expression. The highly abundant and essential 7SK ncRNA has been shown to negatively regulate RNA Polymerase II transcription by inactivating the positive transcription elongation factor b (P-TEFb) in cellular and Tat-dependent HIV transcription. Here, we identify a more general, P-TEFb-independent role of 7SK RNA in directly affecting the function of the architectural transcription factor and chromatin regulator HMGA1. An important regulatory role of 7SK RNA in HMGA1-dependent cell differentiation and proliferation regulation is uncovered with the identification of over 1500 7SK-responsive HMGA1 target genes. Elevated HMGA1 expression is observed in nearly every type of cancer making the use of a 7SK substructure in the inhibition of HMGA1 activity, as pioneered here, potentially useful in therapy. The 7SK-HMGA1 interaction not only adds an essential facet to the comprehension of transcriptional plasticity at the coupling of initiation and elongation, but also might provide a molecular link between HIV reprogramming of cellular gene expression-associated oncogenesis.

Indexed as

Gene Expression RegulationAT-Hook MotifsBase SequenceBinding SitesCompetitive BiddingDNAHEK293 CellsHeLa CellsHMGA1a ProteinHumansMolecular Sequence DataRNA, Small NuclearTranscription, GeneticDNAHMGA1a ProteinRNA, Small Nuclear

Identifiers

PMID21087998
PMCPMC3064786
OpenAlexW2016889082

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.