Evidence map›Paper›PMID 21085196›Full record

ArticleThe ISME journal2011

Pyrosequencing reveals highly diverse and species-specific microbial communities in sponges from the Red Sea.

On On Lee, Yong Wang, Jiangke Yang, Feras F Lafi, Abdulaziz Al-Suwailem, Pei-Yuan Qian

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In one paragraph

Article in The ISME journal, 2011. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 120 papers.

0numbers the graph read from it
0cells of the map it votes in
120citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

120 citing papers in PubMed.

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  16. Ammonia-oxidizing archaea in biological interactions.Journal of microbiology (Seoul, Korea) · 2021
    Review
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60 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

6 authors.

On On LeeKAUST Global Partnership Program, Department of Biology, The Hong Kong University of Science and Technology, Clear Water Bay, Hong Kong.
Yong Wang
Jiangke Yang
Feras F Lafi
Abdulaziz Al-Suwailem
Pei-Yuan Qian

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Marine sponges are associated with a remarkable array of microorganisms. Using a tag pyrosequencing technology, this study was the first to investigate in depth the microbial communities associated with three Red Sea sponges, Hyrtios erectus, Stylissa carteri and Xestospongia testudinaria. We revealed highly diverse sponge-associated bacterial communities with up to 1000 microbial operational taxonomic units (OTUs) and richness estimates of up to 2000 species. Altogether, 26 bacterial phyla were detected from the Red Sea sponges, 11 of which were absent from the surrounding sea water and 4 were recorded in sponges for the first time. Up to 100 OTUs with richness estimates of up to 300 archaeal species were revealed from a single sponge species. This is by far the highest archaeal diversity ever recorded for sponges. A non-negligible proportion of unclassified reads was observed in sponges. Our results demonstrated that the sponge-associated microbial communities remained highly consistent in the same sponge species from different locations, although they varied at different degrees among different sponge species. A significant proportion of the tag sequences from the sponges could be assigned to one of the sponge-specific clusters previously defined. In addition, the sponge-associated microbial communities were consistently divergent from those present in the surrounding sea water. Our results suggest that the Red Sea sponges possess highly sponge-specific or even sponge-species-specific microbial communities that are resistant to environmental disturbance, and much of their microbial diversity remains to be explored.

Indexed as

BiodiversityAnimalsArchaeaBacteriaIndian OceanPhylogenyPoriferaRNA, Ribosomal, 16SSeawaterSequence Analysis, DNASpecies SpecificityRNA, Ribosomal, 16S

Identifiers

PMID21085196
PMCPMC3105750

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.