Evidence map›Paper›PMID 21083746›Full record

ArticleHelicobacter2010

Morphologic, genetic, and biochemical characterization of Helicobacter magdeburgensis, a novel species isolated from the intestine of laboratory mice.

Francisco Rivas Traverso, Ulrich R M Bohr, Omar A Oyarzabal, Manfred Rohde, Alexandra Clarici, Thomas Wex, Doerthe Kuester, Peter Malfertheiner, James G Fox, Steffen Backert

Abstract read
In one paragraph

Article in Helicobacter, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 21 citations in OpenAlex.

  1. Pharmaceutics · 2023
    Article
  2. A Tripartite Efflux System Affects Flagellum Stability inInternational journal of molecular sciences · 2022
    Article
  3. Microbial genomics · 2022
    Article
  4. Article
  5. Cancers · 2020
    Article
  6. Article
  7. Unusual Manifestation of LiveInternational journal of molecular sciences · 2018
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Francisco Rivas TraversoDepartment of Medical Microbiology, Otto von Guericke University Magdeburg, D-39120 Magdeburg, Germany.
Ulrich R M Bohr
Omar A Oyarzabal
Manfred Rohde
Alexandra Clarici
Thomas Wex
Doerthe Kuester
Peter Malfertheiner
James G Fox
Steffen Backert
Otto-von-Guericke University Magdeburg · DEAlabama State University · USHelmholtz Centre for Infection Research · DEMassachusetts Institute of Technology · US

Funding

TOXICOLOGY CORE UNITP30ES002109 · NIEHS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI LEVINE, STUART S · 1985 to 2020
$25.6M
NIEHS NIH HHS P30 ES002109
6 · The paper itself

Abstract

backgroundThe presence of enterohepatic Helicobacter species (EHS) is commonly noted in mouse colonies. These infections often remain unrecognized but can cause severe health complications or more subtle host immune perturbations and therefore can confound the results of animal experiments. The aim of this study was to isolate and characterize a putative novel EHS that has previously been detected by PCR screening of specific-pathogen-free mice. MATERIALS AND

methodsBiochemical analysis of enzyme activities (API campy), morphologic investigation (Gram-staining and electron microscopy) and genetic analyses (16SrRNA and 23SrRNA analyses, DNA fingerprinting, restriction fragment polymorphisms, and pulsed-field gel electrophoresis) were used to characterize isolated EHS. Genomic DNA fragments were sequenced to develop a species-specific PCR detection assay.

resultsScanning electron microscopy revealed the presence of spiral-shaped EHS, which varied in length (2.5-6 μm) and contained single monopolar or single bipolar sheathed flagella. The bacteria were grown under anaerobic conditions, preferably on agar plates containing serum or blood. The 16SrRNA, genetic, and biochemical analyses indicated the identification of a novel EHS species, named Helicobacter magdeburgensis. We also examined the genome content using pulsed-field gel electrophoresis. Based on the pattern produced by two restriction enzymes, BamIII and KspI, the genome size was determined to be about 1.7-1.8 Mbp.

conclusionWe isolated and characterized a novel EHS species, H. magdeburgensis, morphologically, biochemically, and genetically. These results are important for future studies on the prevalence and pathophysiologic relevance of such infections. Our PCR assay can be used to detect and discriminate H. magdeburgensis from other Helicobacter species.

Indexed as

AnimalsBacterial Typing TechniquesCluster AnalysisDNA, BacterialDNA FingerprintingDNA, RibosomalElectrophoresis, Gel, Pulsed-FieldGenotypeHelicobacterHelicobacter InfectionsIntestinesMiceMice, Inbred BALB CMice, Inbred C3HMice, Inbred C57BLMolecular Sequence DataDNA, BacterialDNA, RibosomalRNA, Ribosomal, 16SRNA, Ribosomal, 23S

Identifiers

PMID21083746
PMCPMC4369761
OpenAlexW2126605699

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.