Evidence map›Paper›PMID 21082023›Full record

ArticlePloS one2010

A draft of the human septin interactome.

Marcel Nakahira, Joci Neuby Alves Macedo, Thiago Vargas Seraphim, Nayara Cavalcante, Tatiana A C B Souza, Julio Cesar Pissuti Damalio, Luis Fernando Reyes, Eliana M Assmann, Marcos R Alborghetti, Richard C Garratt and 4 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 104 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Septins, a cytoskeletal protein family, with emerging role in striated muscle.Journal of muscle research and cell motility · 2021
    Review
  10. Review
  11. Septins in Infections: Focus on Viruses.Pathogens (Basel, Switzerland) · 2021
    Review
  12. Review
  13. The Structural Biology of Septins and Their Filaments: An Update.Frontiers in cell and developmental biology · 2021
    Review
  14. Article
  15. Article
  16. A blueprint of septin expression in human tissues.Functional & integrative genomics · 2019
    Article
  17. Article
  18. Article
  19. Journal of parasitology research · 2019
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 1 country.

Marcel NakahiraLaboratório Nacional de Biociências, Centro Nacional de Pesquisa em Energia e Materiais, Campinas, Brasil.
Joci Neuby Alves Macedo
Thiago Vargas Seraphim
Nayara Cavalcante
Tatiana A C B Souza
Julio Cesar Pissuti Damalio
Luis Fernando Reyes
Eliana M Assmann
Marcos R Alborghetti
Richard C Garratt
Ana Paula U Araujo
Nilson I T Zanchin
João A R G Barbosa
Jörg Kobarg
Universidade de São Paulo · BRLaboratório Nacional de Ciência e Tecnologia do Bioetanol · BRBrazilian Center for Research in Energy and Materials · BRUniversidade Estadual de Campinas (UNICAMP) · BRUniversidade Católica de Brasília · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSeptins belong to the GTPase superclass of proteins and have been functionally implicated in cytokinesis and the maintenance of cellular morphology. They are found in all eukaryotes, except in plants. In mammals, 14 septins have been described that can be divided into four groups. It has been shown that mammalian septins can engage in homo- and heterooligomeric assemblies, in the form of filaments, which have as a basic unit a hetero-trimeric core. In addition, it has been speculated that the septin filaments may serve as scaffolds for the recruitment of additional proteins. METHODOLOGY/PRINCIPAL

findingsHere, we performed yeast two-hybrid screens with human septins 1-10, which include representatives of all four septin groups. Among the interactors detected, we found predominantly other septins, confirming the tendency of septins to engage in the formation of homo- and heteropolymeric filaments. CONCLUSIONS/SIGNIFICANCE: If we take as reference the reported arrangement of the septins 2, 6 and 7 within the heterofilament, (7-6-2-2-6-7), we note that the majority of the observed interactions respect the "group rule", i.e. members of the same group (e.g. 6, 8, 10 and 11) can replace each other in the specific position along the heterofilament. Septins of the SEPT6 group preferentially interacted with septins of the SEPT2 group (p<0.001), SEPT3 group (p<0.001) and SEPT7 group (p<0.001). SEPT2 type septins preferentially interacted with septins of the SEPT6 group (p<0.001) aside from being the only septin group which interacted with members of its own group. Finally, septins of the SEPT3 group interacted preferentially with septins of the SEPT7 group (p<0.001). Furthermore, we found non-septin interactors which can be functionally attributed to a variety of different cellular activities, including: ubiquitin/sumoylation cycles, microtubular transport and motor activities, cell division and the cell cycle, cell motility, protein phosphorylation/signaling, endocytosis, and apoptosis.

Indexed as

Two-Hybrid System TechniquesBinding, CompetitiveCarrier ProteinsCell Cycle ProteinsCytoskeletal ProteinsHumansMultigene FamilyProtein BindingSeptinsCarrier ProteinsCell Cycle ProteinsCytoskeletal ProteinsSEPTIN2 protein, humanseptin 3SEPTIN6 protein, humanSEPTIN7 protein, humanSeptins

Identifiers

PMID21082023
PMCPMC2970546
OpenAlexW2015246310

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.