Evidence map›Paper›PMID 21081082›Full record

ArticleBiophysical journal2010

Nucleotide-dependent shape changes in the reverse direction motor, myosin VI.

Chun Feng Song, Kasim Sader, Howard White, John Kendrick-Jones, John Trinick

Abstract read
In one paragraph

Article in Biophysical journal, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Unconventional Myosins: How Regulation Meets Function.International journal of molecular sciences · 2019
    Review
  3. Article
  4. Article
  5. Calcium can mobilize and activate myosin-VI.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  6. Article
  7. Article
  8. Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Chun Feng SongInstitute of Molecular and Cellular Biology, Leeds University, Leeds, UK.
Kasim Sader
Howard White
John Kendrick-Jones
John Trinick

Funding

CRYOELECTRONMICROSCOPY OF ACTOS1 ATPASE INTERMEDIATESR01EB000209 · NIBIB · EASTERN VIRGINIA MEDICAL SCHOOL · PI WHITE, HOWARD D. · 2002 to 2008
$2.1M
Biotechnology and Biological Sciences Research CouncilMedical Research Council MC_U105184323NIBIB NIH HHS EB00209NIBIB NIH HHS R01 EB000209
6 · The paper itself

Abstract

We have studied the shape of myosin VI, the actin minus-end directed motor, by negative stain and metal shadow electron microscopy. Single particle processing was used to make two-dimensional averages of the stain images, which greatly increases the clarity and allows detailed comparisons with crystal structures. A total of 169,964 particle images were obtained from two different constructs in six different states (four nucleotide states and with and without Ca(2+)). The shape of truncated apo myosin VI was very similar to the apo crystal structure, with the lever arm bent strongly backward and around the motor domain. In the full-length molecule, the C-terminal part of the tail has an additional bend taking it back across the motor domain, which may reflect a regulated state. Addition of ATP, ADP, or ATP-γS resulted in a large change, straightening the molecule from the bent shape and swinging the lever by ∼140°. Although these nucleotides would not be expected to produce the pre-powerstroke state, myosin VI in their presence was most similar to the truncated crystal structure with bound ADP-VO(4), which is thought to show the pre-powerstroke shape. The nucleotide data were therefore substantially different from expectation based on crystal structures. The full-length molecule was almost completely monomeric; only ∼1% were dimers, joined through the ends of the tail. Addition of calcium ions appeared to result in release of the second calmodulin light chain. In negatively stained molecules there was little indication of extended α-helical structure in the tail, but molecules viewed by metal shadowing had a tail ∼3× longer, 29 vs. 9 nm, part of which is likely to be a single α-helix.

Indexed as

Adenosine DiphosphateAdenosine TriphosphateAnimalsApoproteinsCalciumChickensMyosin Heavy ChainsNucleotidesProtein MultimerizationProtein Structure, Tertiaryadenosine 5'-O-(3-thiotriphosphate)Adenosine DiphosphateAdenosine TriphosphateApoproteinsCalciumMyosin Heavy Chainsmyosin VINucleotides

Identifiers

PMID21081082
PMCPMC2980756

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.