Evidence map›Paper›PMID 21080496›Full record

ReviewProteomics2010

Analysis of phagosomal proteomes: from latex-bead to bacterial phagosomes.

Qingbo Li, Chinnaswamy Jagannath, Prahlad K Rao, Christopher R Singh, Giovanni Lostumbo

Abstract readReview
In one paragraph

Review in Proteomics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Proteome analysis ofFrontiers in cellular and infection microbiology · 2022
    Article
  5. Phagocyte Escape ofFrontiers in immunology · 2020
    Review
  6. Article
  7. Article
  8. Review
  9. Purification and proteomics of pathogen-modified vacuoles and membranes.Frontiers in cellular and infection microbiology · 2015
    Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Protein microarrays and biomarkers of infectious disease.International journal of molecular sciences · 2010
    Review
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Qingbo LiCenter for Pharmaceutical Biotechnology, University of Illinois at Chicago, Chicago, IL 60607, USA. qkli@uic.edu
Chinnaswamy Jagannath
Prahlad K Rao
Christopher R Singh
Giovanni Lostumbo
University of Illinois Chicago · USThe University of Texas Health Science Center at Houston · US

Funding

Molecular Basis of Infectious Diseases Training GrantT32AI055449 · NIAID · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI LORENZ, MICHAEL C · 2005 to 2025
$2.6M
NIAID NIH HHS T32 AI055449
6 · The paper itself

Abstract

Phagosomal proteome characterization has contributed significantly to the understanding of host-pathogen interaction and the mechanism of infectious diseases caused by intracellular bacteria. The latex bead-containing phagosome has been widely used as a model system to study phagosomal proteomes at a global level. In contrast, the study of bacteria-containing phagosomes at a similar level has just begun. A number of intracellular microbial species are studied for their proteomes during the invasion of a host, providing insight into their metabolic adaptation in host cells and interaction with host-cell antimicrobial environments. In this review, we attempt to summarize the most recent advancements in the proteomic study of microbial phagosomes, especially those originating from mouse or human cells. We also briefly describe the proteomics of latex bead-containing phagosomes because they are often used as model phagosomes for study. We provide descriptions on major biological and technological components in phagosomal proteome studies. We also discuss the role of phagosomal proteome study in the broader horizon of systems biology and the technological challenges in phagosomal proteome characterization.

Indexed as

ProteomicsAnimalsBiomarkersHeLa CellsHumansMiceMicrospheresPhagocytosisPhagosomesrab GTP-Binding ProteinsRatsSystems BiologyBiomarkersrab GTP-Binding Proteins

Identifiers

PMID21080496
PMCPMC4131734
OpenAlexW2154356258

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.