Evidence map›Paper›PMID 21080494›Full record

ReviewProteomics2010

Molecular characterization of the endoplasmic reticulum: insights from proteomic studies.

Xuequn Chen, Alla Karnovsky, Maria Dolors Sans, Philip C Andrews, John A Williams

Open access · greenAbstract readReview
In one paragraph

Review in Proteomics, 2010. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 61 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Review
  7. Article
  8. Use of Zebrafish Models to Boost Research in Rare Genetic Diseases.International journal of molecular sciences · 2021
    Review
  9. SP3-FAIMS Chemoproteomics for High-Coverage Profiling of the Human Cysteinome*.Chembiochem : a European journal of chemical biology · 2021
    Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Autophagy, Unfolded Protein Response and Lung Disease.Current research in cell biology · 2020
    Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Xuequn ChenDepartment of Molecular and Integrative Physiology, The University of Michigan, Ann Arbor, MI, USA. xchen@med.wayne.edu
Alla Karnovsky
Maria Dolors Sans
Philip C Andrews
John A Williams
University of Michigan–Ann Arbor · US

Funding

University of Michigan Center for Gastrointestinal ResearchP30DK034933 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI OWYANG, CHUNG · 1986 to 2021
$22.5M
UNDERSTANDING THE PATHOGENESIS OF CAMPYLOBACTER JEJUNIP41RR018627 · NCRR · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI FINLEY, RUSSELL L · 2003 to 2007
$12.4M
Calcium and Pancreatic Stimulus-Secretion CouplingR37DK041122 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI WILLIAMS, JOHN A · 2006 to 2015
$3.2M
NCRR NIH HHS P41 RR018627NIDDK NIH HHS P30 DK034933NIDDK NIH HHS P30 DK34933NIDDK NIH HHS R37 DK041122NIDDK NIH HHS R37 DK41122
6 · The paper itself

Abstract

The endoplasmic reticulum (ER) is a multifunctional intracellular organelle responsible for the synthesis, processing and trafficking of a wide variety of proteins essential for cell growth and survival. Therefore, comprehensive characterization of the ER proteome is of great importance to the understanding of its functions and has been actively pursued in the past decade by scientists in the proteomics field. This review summarizes major proteomic studies published in the past decade that focused on the ER proteome. We evaluate the data sets obtained from two different organs, liver and pancreas each of which contains a primary cell type (hepatocyte and acinar cell) with specialized functions. We also discuss how the nature of the proteins uncovered is related to the methods of organelle purification, organelle purity and the techniques used for protein separation prior to MS. In addition, this review also puts emphasis on the biological insights gained from these studies regarding the molecular functions of the ER including protein synthesis and translocation, protein folding and quality control, ER-associated degradation and ER stress, ER export and membrane trafficking, calcium homeostasis and detoxification and drug metabolism.

Indexed as

ProteomicsAnimalsCattleCricetinaeDatabases, ProteinDogsEndoplasmic ReticulumHumansMiceRats

Identifiers

PMID21080494
PMCPMC3517137
OpenAlexW2074200918

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.